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Showing: 1 - 20 of 254 results
  1. Tips for a 1st time AAV user (by a Rookie AAV user)

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    Blog Post
    ...needed for packaging AAV. AAV production Overview: The first step in packaging AAV is transfecting HEK293...present in an AAV prep. AAV samples are first DNaseI digested to remove any residual AAV plasmid that ... lab's vector of choice is AAV, with nearly every experiment requiring AAV. Before joining my lab, I had... cells with AAV packaging plasmids. The cells need three different plasmids to produce AAV: 1) the RepCap...plasmid which provides the AAV replication (rep) and capsid (cap) genes. AAV replication uses the host’...the Addgene AAV Production protocol for more details. Pro tips I’m not going to lie, AAV transfer plasmids...experiment. AAV is usually the limiting reagent for my experiments, so I always make more AAV than I think...
  2. Find and Share AAV Data with Addgene's New AAV Data Hub

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    Blog Post
    ... launching the AAV Data Hub. The Data Hub is an open platform for scientists using AAV to share practical... rat. Contribute your AAV data Just like Addgene’s plasmid repository, the AAV Data Hub is a community-driven...Dear scientists using AAV, We hear your questions! How much virus should I inject? How long do I need...Hub and how to use it From the landing page of the AAV Data Hub, you will be able to search for your favorite...accompanying image so that you can see for yourself how the AAV performed in that experimental setup. For example...contribution to open science.  Please note that the AAV Data Hub is a beta project, and we are currently ...distributed by Addgene.  Future directions As the AAV Data Hub grows, we hope to mine the data to find ...
  3. AAV Purification by Iodixanol Gradient Ultracentrifugation

    Type
    Protocol
    ...pure adeno-associated virus (AAV) preps for use in your research.... Protocols AAV Purification by Iodixanol...Iodixanol Gradient Ultracentrifugation AAV Purification by Iodixanol Gradient Ultracentrifugation You may also...Introduction This protocol can be used to purify AAV of any serotype. In medicine, iodixanol can be used...performing a buffer exchange before using the purified AAV in vivo . The iodixanol gradient in this protocol...steps that separate out contaminants from an impure AAV preparation. The 15% iodixanol step has 1M NaCl to...containing) particles. On average, iodixanol-purified AAV preparations contain ~20% empty particles. 60% iodixanol...
  4. AAV Titration by qPCR Using SYBR Green Technology

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    Protocol
    ...genome-containing particles in an AAV prep using qPCR, SYBR Green Technology, and Addgene’s AAV Titration protocol. ... Protocols AAV Titration by qPCR Using SYBR Green Technology AAV Titration by qPCR Using SYBR Green Technology...validated using an internal reference AAV of known titer, 100837-AAV1, and by measuring the titer of samples...Virus Blog Posts Mol Bio Protocols Introduction The AAV Titration protocol can be used to determine the number... number of genome-containing particles of an AAV prep using SYBR green technology. This protocol was validated...samples in duplicate at least If possible, include an AAV reference sample of known titer. The reference material...when the plasmid is linearized. Treat the purified AAV samples with DNase I to eliminate any contaminating...
  5. AAV ddPCR Titration

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    Protocol
    ... Protocols ddPCR Titration of AAV Vectors ddPCR Titration of AAV Vectors You...You may also like... AAV Titration by qPCR AAV Viral Service Viral Vector Guides Virus Blog Posts Molecular... additional tips on AAV titering using ddPCR, read this blog post on ddPCR for AAV quantification. This...for purified AAV titration. Protocols...purified recombinant Adeno-associated viral vectors (AAV). This protocol specifically uses primers and probes...series outlined in this protocol are based on an AAV titer range of 5E+12–5E+13 GC/mL, where GC is genome...pipettes and surfaces with 10% bleach. Safety Warnings AAV is generally considered biosafety level 1 but may...
  6. Improving Transduction Efficiency with Exosome AAVs

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    Blog Post
    ...anti-AAV antibodies often neutralize the therapeutic efficacy of AAV vectors. How are exosome AAVs produced... exosome AAVs achieved so far? Exo-AAVs have improved transduction profiles in different AAV serotypes...lysis to release AAV particles with subsequent purification steps. It’s also possible for AAV vectors to be... They saw that these AAV particles come in a slightly different shape. These AAV particles are often found...name vexosomes (vector-exosomes), exosome AAVs, or exo-AAVs (Figure 1). The researchers discovered that... They also found that exo-AAVs were more resistant to neutralizing anti-AAV antibodies. This is particularly...microvesicles containing AAVs (Figure 2). Since the development of the exo-AAV isolation protocol by Maguire...
  7. New and Upcoming Viral Vectors - June 2019

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    Blog Post
    ...popular control AAV encoding GFP. Check out our inventory of serotype testing AAV New control AAVs Plasmid...Flp-expressing AAV, as well as a Cre-dependent Flp-expressing AAV. See our recombinase AAV inventory here...testing) pAAV-CAG-GFP 50465 AAV8, 9 (20 µL size serotype testing) AAV-hSyn-EGFP Biosensor AAV The ability...Serotype Name 104496  AAV1 pGP-AAV-CAG-FLEX-jGCaMP7f-WPRE 105322  AAV1 pGP-AAV-syn-FLEX-jGCaMP7c variant...Name 119741  AAV5  AAV SYN flex PSAM4 GlyR IRES EGFP Recombinase AAV Finally, we are excited to add...some of the AAV we have released in the last few months. You can also browse our entire AAV inventory. .... Our new AAVs include: Control AAVs for serotype testing jGCaMP7c for calcium detection PSAM4 GlyR for...
  8. Adeno Associated Virus (AAV) for Cell and Gene Therapy

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    Blog Post
    ...types. AAVs in the clinic Thus far, AAV vectors AAV1, AAV-2, AAV1-AAV2 hybrids, AAV-6, AAV-7, AAV-8, AAV...-to-use AAV in Addgene's Viral Service Check out our AAV Production Protocol Check out our AAV Purification...wild type AAV is not associated with any pathogenicity and has a low immunogenic profile. AAV was first...of known AAV serotypes that have slight variations in their viral capsids. Novel forms of AAV capsids ...characteristic makes AAV vectors especially amenable to correcting disease-associated mutations. AAV vectors maintain... safe and effective. Challenges for AAV gene therapy Although AAV-based gene therapies are promising, ...already have wt AAV in their bodies and may therefore already have ways to prevent AAV infection. For ...
  9. Important Considerations When Using AAVs

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    Blog Post
    ... cells an AAV can infect) can influence an AAV’s value greatly. Applying this mantra to AAV selection,...capacity, AAV vectors were suitable for our needs for the following reasons: Safety: Since AAVs are nonpathogenic...solution should be used to clean AAVs from workspaces. Speed: AAV transduction experiments are relatively...priority in our lab so we opted for AAV. While these benefits make AAVs useful for a wide variety of experiments...viral-vectors/aav/aav-guide. Where in the tissue/what cell type? In the CNS, for instance, there are marked...Serotype Striatum AAV5>AAV9>AAV8>AAV1>AAV6>AAV2 Hippocampus AAV9>AAV5>AAV8>AAV1>AAV6>AAV2 Auditory Cortex... use of AAVs? 1) Combined functional and anatomical mapping of circuits In our lab, we use AAV-DREADD ...
  10. Adeno-associated Viruses (AAVs) for Genome Editing

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    Blog Post
    ...can use AAVs to improve your genome editing experiments (with and without targeted nucleases). AAV genome...biology behind this AAV effect remains unclear, it is likely not a coincidence that the AAV genome is composed...disadvantages to the AAV-based approach that must be considered when deciding whether to use AAV or CRISPR for...of SaCas9 and a gRNA in one AAV and a repair template in second a second AAV to deliver their repair template...across two AAVs, it is possible sequentially repair a target site with the contents of the two AAVs. Using...to use and develop AAVs for your own research and encourage to deposit any new AAV tools you create. ...Resources on the Addgene Blog AAV: A Versatile Tool for Gene Expression in Mammals AAV Titers: Where do they ...
  11. Viral Vectors 101: Parts of the AAV Transfer Plasmid

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    Blog Post
    ...makes an AAV transfer plasmid an AAV transfer plasmid. ITR sequences are 145 bases each and AAV plasmids... want to do, but it requires some AAV. You’ve never worked with AAV before, but you aren’t going to let...experiments, making AAV starts with some plasmids. You just need three plasmids to start making AAV:  the packaging... the AAV transfer plasmid and take a look at each of its parts. Figure 1: Parts of an AAV transfer... Key elements of an AAV plasmid First let’s talk about the key parts of an AAV plasmid. Inverted terminal...packaged into the AAV molecule. What’s outside of the ITRs does not get packaged in the AAV vector. The cloning...ITR loss abolishing AAV packaging. To prevent ITR loss, it’s best to propagate AAV constructs in recombination-deficient...
  12. AAVs CREATed for Gene Delivery to the CNS and PNS

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    Blog Post
    ...efficiency of AAV-PHP.eB and AAV-PHP.S versus their parental AAV vectors. What can these AAV’s be used for...efficiency of AAV-PHP.B versus AAV-PHP.eB in the CNS. A GFP transgene was packaged into either an AAV-PHP.B or...Search for AAV Vectors to use with your research. Visit Our AAV Guide Page for info on AAV components,... Recombinase-based AAV Targeted Evolution. In this technique, a pool of mutant AAV capsid (cap) expressing...astrocytes. Why screen for IV deliverable AAVs? Typically AAVs are directly injected into the brain, but...one RGB AAV and red, green, or blue are the predominate colors expressed (figure 4c).   AAV Vector  ...et al.   AAV Vector Percent of Neurons Transduced   Dorsal Root Ganglion (DRG) AAV.9 (parental)...
  13. New and Upcoming Viral Vectors - September 2019

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    Blog Post
    ...: pGP-AAV-syn-jGCaMP7f-WPRE (104488-AAV8) pGP-AAV-syn-FLEX-jGCaMP7f-WPRE (104492-AAV8) pGP-AAV-syn-jGCaMP7c...)-EGFP (112677-AAV5) Calcium Sensors pGP-AAV-syn-jGCaMP7b-WPRE (104489-AAVrg) pGP-AAV-syn-FLEX-jGCaMP7b-WPRE...pGP-AAV-syn-FLEX-jGCaMP7b-WPRE (104493-AAVrg) pGP-AAV-CAG-FLEX-jGCaMP7s-WPRE (104495-AAVrg) pGP-AAV-CAG-FLEX-jGCaMP7f-WPRE...some of the AAV we have released in the last few months. You can also browse our entire AAV inventory. .... Our new AAVs include: EGFP-expressing AAV for serotype testing Calcium sensors and GABA sensors Optogenetics...Optogenetics Recombinases And more! Control AAV For many AAV experiments, we recommend validating the serotype...samples of AAV for testing purposes. To address this, we recently released our serotype testing AAV, which...
  14. The Importance of High Titer for AAV Transductions

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    Blog Post
    ...for a refresher on AAV titers Making contact with a cell Although an individual AAV particle’s ability...cell, the way to get more AAV in contact with the cell is to increase the AAV concentration. In this flowchart...optimize AAV production. We’ve listed some simple steps you can take below but you should read our AAV Production...on the Addgene Blog AAV Titers: Where do they come from and what do they mean? AAV Vector Quality Control... Find Ready-to-Use AAV Preps Find Lab Protocols for Work with Virus Watch Our AAV Purification Video ... place? Some AAVs are known to be difficult to produce in high titer. These include AAV2, which is known...Well, it turns out this isn’t the case for using AAV. When it comes to infecting cells, titer, the amount...
  15. Viral Vectors 101: Parts of the AAV Packaging Plasmid

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    Blog Post
    ... parts of the AAV transfer plasmid  Resources on Addgene.org Learn about AAV Find AAVs for your experiment...making the AAVs you need for your experiment:  the packaging plasmid which contains the AAV structural...capsid (cap) gene. In wild-type AAV, these two genes are found between the AAV genome’s two inverted terminal...68 play a key role in AAV genome replication. Replication initiates from the AAV genome ITRs on the transfer...understanding of the AAV RepCap plasmid! Check out this blog post to learn more about the AAV transfer plasmid...terminal repeats (ITRs); but when recombinant AAV (rAAV) is made in the lab, rep and cap are expressed from...regulation of the AAV p40 promoter which drives Cap expression. Often Rep proteins from the AAV2 serotype are...
  16. AAV Titers: Where Do They Come From And What Do They Mean?

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    Blog Post
    ...by using the universal AAV Reference Standard Material (AAV SFM), which is an AAV sample that has been ... quantifying AAV: qPCR efficiency can be affected by second-order structure of the AAV genome, caused...we get more reliable AAV titering? For our viral service, we currently titrate AAV vector preparations ... et al., 2010). In addition to the AAV RSM, we include a second AAV reference sample of known titer, which... infer titer values of new AAV samples. We also typically quantify our AAV sample by two qPCR assays ...2017). What do Addgene AAV titers mean for your experiments? Because (physical) AAV titers are approximations.... If using AAV from different sources in the same experiment, consider retitering both AAV in your lab...
  17. Viral Vectors 101: An Introduction to AAV

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    Blog Post
    ...the basics of AAVs down, you’re ready to take the next step – selecting your AAV and AAV components (serotype...single-stranded AAV (ssAAV) and a self-complementary AAV (scAAV) vector. Full-length ssAAV vector genome...chemogenetics experiments. Recombinant AAVs (rAAVs) The primary application of AAV is delivery of genetic cargo ...speak about AAVs, they are actually referring to rAAVs. ITRs and serotypes The names of AAVs contain two... lot of AAV serotypes, many of which are available in rAAVs!   Figure 1: Diagram of AAV components... self-complementary AAV (scAAV) may be an option (McCarty et al., 2001). This AAV is designed so that ...subtypes, since AAVs tend to be very neuro-permissive (Issa, 2023). Time to expression AAVs have to infect...
  18. Celebrate Open Data Day with Addgene’s AAV Data Hub!

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    Blog Post
    ...injection site from the AAV data hub. How to share your AAV data Do you use Addgene AAV tools and want to... Using AAV Technologies Using AAV for neuronal tracing Resources on Addgene.org Read our AAV guide Browse...growing group of Addgene AAV data sharing champions? If you’ve recently used Addgene AAV tools, we invite you...contributed to the AAV Data Hub. If you haven’t yet, we encourage you to share your AAV data on the hub,... on AAV data hub! Related resources on the Addgene blog Important Considerations When Using AAVs Three... Browse all  AAV vectors Find ready-to-use AAV preps ... celebrate open data sharing than with Addgene’s AAV Data Hub! We launched this pilot in 2019 as an open...
  19. Viral Genome Sequencing - A One Stop Shop for AAV Identity and Serotype Confirmation

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    Blog Post
    ...Gene Therapy. Existing methods for AAV quality control Historically, AAV vector QC has been sparse including...reliably confirm the identity of AAV genomes and detect contaminating AAV DNA. In addition, we wrote an ...the serotype of AAV preparations.  Using viral genome sequencing to determine serotype AAV packaging is ...LH (2017) AAV-ID: A Rapid and Robust Assay for Batch-to-Batch Consistency Evaluation of AAV Preparations...post on AAV titers Browse viral vectors protocols and tips Resources on Addgene.org Find AAVs at Addgene...platform to accommodate adeno-associated viral vector (AAV) samples and created a simplified process, termed...VGS), to confirm the identity and serotype of our AAV preparations. We recently published a description...
  20. Three Key Considerations for Precise Neuronal Targeting Using AAV Technologies

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    Blog Post
    ... experiments with AAV: 1. Getting your viral vector into your cell of interest: AAV tropism and route ...administration AAV tropism is defined by the viral capsid proteins that determine the AAV serotype. During...characteristics of select AAV serotypes in Table 2 from the paper. Delivery of AAV into the brain can usually...our recently launched AAV Data Hub, an open platform where researchers using AAV from our viral service... Learn more about retrograde AAVs Resources on Addgene.org Read our AAV guide Learn more about our viral...With the help of adeno-associated viral vectors (AAV), neuroscientists can combine classical genetic tools...experiments! Late last year, we hosted our first AAV Education and Development workshop aimed at brainstorming...
Showing: 1 - 20 of 254 results