Addgene pBSFI-myr-akt-S473A Sequencing Result - Sequence Analyzer Skip to main content
Addgene

Sequence Analyzer: pBSFI-myr-akt-S473A Sequencing Result

Map View

800 600 400 200 End (896) ApaI (863) PspOMI (859) AvaI - XhoI - BsoBI - PaeR7I (832) SapI - BspQI (822) SacI - BsiHKAI (817) Eco53kI (815) ScaI (756) TatI (754) EcoNI (657) AcuI (526) AlwNI (504) Esp3I - BsmBI (453) XcmI (425) PshAI (357) BtsI - BtsαI (354) BbsI (309) PvuII (296) BsaBI * (247) BsgI (132) HindIII (75) ClaI - BspDI (70) MluI - AflIII (63) KpnI (61) Acc65I (57) NotI - SacII (37) BpmI (36) BtgI (34) SfiI - BglI (30) Start (0) myr pBSFI-myr-akt-S473A 896 bp

Sequence View

Acc65IBglISfiIBtgIBpmISacIINotIStart (0) 5ʹ 3ʹ 60 REQKLELAITAAAASRGSG a a a g g g a a c a a a a g c t g g a g c t g g c c a t t a c g g c c g c g g c c g c c t c t a g a g g a t c t g g t a t t t c c c t t g t t t t c g a c c t c g a c c g g t a a t g c c g g c g c c g g c g g a g a t c t c c t a g a c c a t

HindIIIBspDIClaIKpnIAflIIIMluI 120 1 5 MGSSKSK (in frame with myr) PKSRMN myr TTRIDKLMGSSKSKPKSRMN c c a c g c g t a t c g a t a a g c t t a t g g g g a g c a g c a a g a g c a a g c c c a a g t c t a g a a t g a a c g g g t g c g c a t a g c t a t t c g a a t a c c c c t c g t c g t t c t c g t t c g g g t t c a g a t c t t a c t t g c

BsgI 180 (in frame with myr) DVAIVKEGWLHKRGEYIKTW DVAIVKEGWLHKRGEYIKTW a c g t a g c c a t t g t g a a g g a g g g c t g g c t g c a c a a a c g a g g g g a a t a t a t t a a a a c c t g g c t g c a t c g g t a a c a c t t c c t c c c g a c c g a c g t g t t t g c t c c c c t t a t a t a a t t t t g g a c c g

240 (in frame with myr) RPRYFLLKNDGTFIGYKERP RPRYFLLKNDGTFIGYKERP g g c c a c g c t a c t t c c t c c t c a a g a a c g a t g g c a c c t t t a t t g g c t a c a a g g a a c g g c c t c c c g g t g c g a t g a a g g a g g a g t t c t t g c t a c c g t g g a a a t a a c c g a t g t t c c t t g c c g g a g

PvuIIBsaBI* 300 (in frame with myr) QDVDQRESPLNNFSVAQCQL QDVDQRESPLNNFSVAQCQL a g g a t g t g g a t c a g c g a g a g t c c c c a c t c a a c a a c t t c t c a g t g g c a c a a t g c c a g c t g a t c c t a c a c c t a g t c g c t c t c a g g g g t g a g t t g t t g a a g a g t c a c c g t g t t a c g g t c g a c t

BtsαIBtsIPshAIBbsI 360 (in frame with myr) MKTERPRPNTFIIRCLQWTT MKTERPRPNTFIIRCLQWTT t g a a g a c a g a g c g g c c a a g g c c c a a c a c c t t t a t c a t c c g c t g c c t g c a g t g g a c c a c a g a c t t c t g t c t c g c c g g t t c c g g g t t g t g g a a a t a g t a g g c g a c g g a c g t c a c c t g g t g t c

420 (in frame with myr) VIERTFHVETPEEREEWATA VIERTFHVETPEEREEWATA t c a t t g a g c g c a c c t t c c a t g t g g a a a c g c c t g a g g a g c g g g a a g a a t g g g c c a c c g c c a a g t a a c t c g c g t g g a a g g t a c a c c t t t g c g g a c t c c t c g c c c t t c t t a c c c g g t g g c g g t

BsmBIEsp3IXcmI 480 (in frame with myr) IQTVADGLKRQEEETMDFRS IQTVADGLKRQEEETMDFRS t t c a g a c t g t g g c c g a t g g a c t c a a g a g g c a g g a a g a a g a g a c g a t g g a c t t c c g a t c a g a a g t c t g a c a c c g g c t a c c t g a g t t c t c c g t c c t t c t t c t c t g c t a c c t g a a g g c t a g t c

AcuIAlwNI 540 (in frame with myr) GSPSDNSGAEEMEVSLAKPK GSPSDNSGAEEMEVSLAKPK g c t c a c c c a g t g a c a a c t c a g g g g c t g a a g a g a t g g a g g t g t c c c t g g c c a a g c c c a a g c c g a g t g g g t c a c t g t t g a g t c c c c g a c t t c t c t a c c t c c a c a g g g a c c g g t t c g g g t t c g

600 (in frame with myr) HRVTMNEFEYLKLLGKGTFG HRVTMNEFEYLKLLGKGTFG a c c g t g t g a c c a t g a a c g a g t t t g a g t a c c t g a a a c t a c t g g g c a a g g g c a c c t t t g g g a t g g c a c a c t g g t a c t t g c t c a a a c t c a t g g a c t t t g a t g a c c c g t t c c c g t g g a a a c c c t

EcoNI 660 (in frame with myr) KVILVKEKATGRYYAMKILK KVILVKEKATGRYYAMKILK a a g t g a t t c t g g t g a a a g a g a a g g c c a c a g g c c g c t a c t a t g c c a t g a a g a t c c t c a a g a t t c a c t a a g a c c a c t t t c t c t t c c g g t g t c c g g c g a t g a t a c g g t a c t t c t a g g a g t t c t

720 (in frame with myr) KEVIVAKDEVAHTLTENRVL KEVIVAKDEVAHTLTENRVL a g g a g g t c a t c g t c g c c a a g g a t g a g g t t g c c c a c a c g c t t a c t g a g a a c c g t g t c c t g c t c c t c c a g t a g c a g c g g t t c c t a c t c c a a c g g g t g t g c g a a t g a c t c t t g g c a c a g g a c g

TatIScaI 780 (in frame with myr) QNSRHPFLTALKYSFQTHDR QNSRHPFLTALKYSFQTHDR a g a a c t c t a g g c a t c c c t t c c t t a c g g c c c t c a a g t a c t c a t t c c a g a c c c a c g a c c g c c t c t t g a g a t c c g t a g g g a a g g a a t g c c g g g a g t t c a t g a g t a a g g t c t g g g t g c t g g c g g

PaeR7IBsoBIXhoIAvaIEco53kIBsiHKAISacIBspQISapI 840 (in frame with myr) LCFVMEYANGGELFFHLSRE LCFVMEYANGGELFFHLSRE t c t g c t t t g t c a t g g a g t a t g c c a a c g g g g g c g a g c t c t t c t t c c a c c t g t c t c g a g a g c a g a c g a a a c a g t a c c t c a t a c g g t t g c c c c c g c t c g a g a a g a a g g t g g a c a g a g c t c t c g

End (896) PspOMIApaI 3ʹ 5ʹ 896 (in frame with myr) RVFSEDRARFYGAEIVSAL RVFSEDRARFYGAEIVSAL g c g t g t t c t c c g a g g a c c g g g c c c g c t t c t a t g g t g c g g a g a t t g t g t c t g c c c t g c g c a c a a g a g g c t c c t g g c c c g g g c g a a g a t a c c a c g c c t c t a a c a c a g a c g g g a c

Restriction Enzymes

Instructions: By default, all cutters are shown. Filter on number of cut sites or search by enzyme name.

Filter

Features

Primers

BLAST

BLAST (Basic Local Alignment Search Tool) finds regions of similarity between biological sequences. Click on the buttons below to submit a BLAST search to NCBI. The results will appear in a new window. See your recent BLAST results on NCBI's website.

  • Nucleotide-Nucleotide BLAST (BLASTN)

  • Translated Nucleotide-Protein BLAST (BLASTX)

  • Sequence alignment using BLAST (BLAST2)

Sequence Analyzer Guide

Map

Displays a graphical map based on nucleotide sequence data labeled with restriction enzymes, plasmid features, ORFs (theoretical open reading frames) and primers. Hovering over data labels will display additional information (e.g. cut site)

To select a portion of sequence, click one location on the plasmid and then a second location to display the sequence between the two locations.

Sequence

Displays both strands of base paired nucleotide sequences with annotated enzymes, plasmid features, ORFs (theoretical open reading frames) and primers. Hovering over data labels will display additional information (e.g. cut site).

To select a portion of sequence, click one location on the sequence and then a second location to display the sequence between the two locations.

Enzymes

List of restriction enzymes that can cut a given nucleotide sequence. Table lists enzyme name and the sequence location of the cut.

Features

List of common features detected in a given nucleotide sequence. Table lists feature name, location, size, color used to indicate its position on the map, and direction (if relevant).

Primers

List of commonly used primers detected in a given nucleotide sequence. Table lists primer name, sequence, length, binding site location, and direction.

BLAST

Use Basic Local Alignment Search Tool (BLAST) via the NCBI website to determine similarity between a given sequence and nucleotide (BLASTN) or protein (BLASTX) sequence databases. Additionally, align a custom nucleotide sequence against a given sequence using BLAST2.

File Downloads

GenBank

File contains the nucleotide sequence and annotated features in GenBank flat file format. Open the file with a text editor or plasmid mapping software to view the sequence.

SnapGene

File contains the nucleotide sequence and enhanced annotations from SnapGene Server. Open the file with SnapGene software or the free Viewer to view the plasmid map, sequence, and perform additional sequence analysis.