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A pseudovirus system enables deep mutational scanning of the full SARS-CoV-2 spike.

Dadonaite B, Crawford KHD, Radford CE, Farrell AG, Yu TC, Hannon WW, Zhou P, Andrabi R, Burton DR, Liu L, Ho DD, Chu HY, Neher RA, Bloom JD
Cell. 2023 Mar 16;186(6):1263-1278.e20. doi: 10.1016/j.cell.2023.02.001. Epub 2023 Feb 13. (Link opens in a new window) PubMed (Link opens in a new window) Article

Plasmids from Article

ID Plasmid Purpose
204142HDM_omicron_B11529_IDTDNAExpression plasmid for SARS-CoV-2 BA.1 variant spike
204146pH2rU3_ForInd_Omicron_sinobiological_Spiked21_T7_CMV_ZsGT2APurRLentivirus backbone with BA.1 spike under an inducible promoter and constitutive expressed zsGreen-T2A-PuR genes
204149HDM_Spikedelta21_sinobiological_B.1.617.2Expression plasmid for SARS-CoV-2 Delta variant spike
204151pH2rU3_ForInd_sinobiological_617.2_Spiked21_CMV_ZsGT2APurRLentivirus backbone with Delta spike under an inducible promoter and constitutive expressed zsGreen-T2A-PuR genes
204152HDM-Hgpm2Lentivirus helper plasmid coding for Gag/Pol
204153pRC-CMV-Rev1bLentivirus helper plasmid coding for Rev
204154HDM-tat1bLentivirus helper plasmid coding for Tat
204155pHAGE2_EF1a_TetOn_IRES_mCherryLentivirus backbone expressing rtTA linked to mCherry
204156HDM_VSV_GVSV-G expression plasmid
204579pH2rU3_ForInd_mCherry_CMV_ZsGT2APurRlentivirus backbone cloning vector and template for barcoded non-neutralizable standard production

Antibodies from Article