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Measuring transcription factor binding and gene expression using barcoded self-reporting transposon calling cards and transcriptomes.

Lalli M, Yen A, Thopte U, Dong F, Moudgil A, Chen X, Milbrandt J, Dougherty JD, Mitra RD
NAR Genom Bioinform. 2022 Aug 31;4(3):lqac061. doi: 10.1093/nargab/lqac061. eCollection 2022 Sep. (Link opens in a new window) PubMed (Link opens in a new window) Article

Plasmids from Article

ID Plasmid Purpose
193143PB-SRT-Puro_BC1Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193144PB-SRT-Puro_BC2Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193145PB-SRT-Puro_BC3Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193146PB-SRT-Puro_BC4Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193147PB-SRT-Puro_BC5Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193148PB-SRT-Puro_BC6Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193149PB-SRT-Puro_BC7Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193150PB-SRT-Puro_BC8Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193151PB-SRT-Puro_BC9Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193152PB-SRT-Puro_BC10Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193153PB-SRT-Puro_BC11Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193154PB-SRT-Puro_BC12Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193155PB-SRT-Puro_BC13Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193156PB-SRT-Puro_BC14Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193157PB-SRT-Puro_BC15Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193158PB-SRT-Puro_BC16Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193159PB-SRT-Puro_BC17Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193160PB-SRT-Puro_BC18Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193161PB-SRT-Puro_BC19Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193162PB-SRT-Puro_BC20Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193163PB-SRT-Puro_BC21Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193164PB-SRT-Puro_BC22Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193165PB-SRT-Puro_BC23Barcoded piggyBac self-reporting transposon with puromycin marker for mammalian calling cards
193166AAV-PB-SRT-tdTomato_BC1Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193168AAV-PB-SRT-tdTomato_BC3Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193169AAV-PB-SRT-tdTomato_BC4Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193170AAV-PB-SRT-tdTomato_BC5Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193171AAV-PB-SRT-tdTomato_BC6Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193172AAV-PB-SRT-tdTomato_BC7Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193174AAV-PB-SRT-tdTomato_BC11Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193175AAV-PB-SRT-tdTomato_BC10Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193176AAV-PB-SRT-tdTomato_BC9Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193177AAV-PB-SRT-tdTomato_BC12Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193178AAV-PB-SRT-tdTomato_BC13Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193179AAV-PB-SRT-tdTomato_BC14Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193180AAV-PB-SRT-tdTomato_BC15Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193181AAV-PB-SRT-tdTomato_BC16Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193182AAV-PB-SRT-tdTomato_BC17Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193183AAV-PB-SRT-tdTomato_BC18Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193185AAV-PB-SRT-tdTomato_BC20Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193186AAV-PB-SRT-tdTomato_BC21Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193187AAV-PB-SRT-tdTomato_BC22Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone
193188AAV-PB-SRT-tdTomato_BC23Barcoded piggyBac self-reporting transposon with tdTomato marker in AAV backbone

Antibodies from Article