DNA-mediated dimerization on a compact sequence signature controls enhancer engagement and regulation by FOXA1.
Wang X, Srivastava Y, Jankowski A, Malik V, Wei Y, Del Rosario RC, Cojocaru V, Prabhakar S, Jauch R
Nucleic Acids Res. 2018 Jun 20;46(11):5470-5486. doi: 10.1093/nar/gky259.
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Plasmids from Article
| ID | Plasmid | Purpose |
|---|---|---|
| 113350 | PVT1-luciferase | evaluate FOXA1 DIV motif enhancer activity near 50 kb of PVT1 gene |
| 113351 | ESR1-luciferase | evaluate FOXA1 DIV motif enhancer activity near 50 kb of ESR1 gene |
| 113352 | QSOX1-luciferase | evaluate FOXA1 DIV motif enhancer activity near 50 kb of QSOX1 gene |
| 113353 | KAT6B-luciferase | evaluate FOXA1 DIV motif enhancer activity near 50 kb of KAT6B gene |
| 113354 | ATP9A-luciferase | evaluate FOXA1 DIV motif enhancer activity near 50 kb of ATP9A gene |
| 113355 | rs795-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs7957274 major allele (T) |
| 113356 | rs795-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs7957274 minor allele (C) |
| 113357 | rs699-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs6990531 major allele (T) |
| 113358 | rs699-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs6990531 minor allele (G) |
| 113359 | rs622-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs62288111 major allele (T) |
| 113360 | rs622-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs62288111 minor allele (C) |
| 113361 | rs700-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs7007731 major allele (C) |
| 113362 | rs700-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs7007731 minor allele (T) |
| 113363 | rs769-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs7697634 major allele (C) |
| 113364 | rs769-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs7697634 minor allele (T) |
| 113365 | rs344-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs34466261 major allele (AC) |
| 113366 | rs344-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs34466261 minor allele (A) |
| 113367 | rs117-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs11716984 major allele (A) |
| 113368 | rs117-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs11716984 minor allele (T) |
| 113369 | rs438-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs4384382 major allele (A) |
| 113370 | rs438-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs4384382 minor allele (G) |
| 113371 | rs281-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs281038 major allele (A) |
| 113372 | rs281-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs281038 minor allele (G) |
| 113373 | rs294-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs2941742 major allele (A) |
| 113374 | rs294-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs2941742 minor allele (G) |
| 113375 | rs676-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs67668514 major allele (A) |
| 113376 | rs676-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs67668514 minor allele (-) |
| 113377 | rs210-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs2104047 major allele (A) |
| 113378 | rs210-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs2104047 minor allele (G) |
| 113379 | rs214-major | evaluate FOXA1 DIV motif enhancer activity in SNP rs2149943 major allele (C) |
| 113380 | rs214-minor | evaluate FOXA1 DIV motif enhancer activity in SNP rs2149943 minor allele (T) |
| 113381 | PVT1-Tol2 | evaluate FOXA1 DIV motif enhancer activity near 50 kb of PVT1 gene |
| 113382 | ESR1-Tol2 | evaluate FOXA1 DIV motif enhancer activity near 50 kb of ESR1 gene |
| 113383 | QSOX1-Tol2 | evaluate FOXA1 DIV motif enhancer activity near 50 kb of QSOX1 gene |
| 113384 | KAT6B-Tol2 | evaluate FOXA1 DIV motif enhancer activity near 50 kb of KAT6B gene |
| 113385 | ATP9A-Tol2 | evaluate FOXA1 DIV motif enhancer activity near 50 kb of ATP9A gene |