MoClo-YTK
(Kit #
1000000061
)
Depositing Lab: John Dueber
This collection contains a set of 96 standardized and characterized parts that can be used for bottom-up hierarchical assembly of single and multi-gene constructs for S. cerevisiae expression. This kit adapts the MoClo stategy for assembly (but may not be compatible with other MoClo kits), and includes an assortment of parts (promoters, terminators, peptide tags, selection cassettes, etc).
This kit will be sent as bacterial glycerol stocks in 96-well plate format.
Original Publication
A Highly-characterized Yeast Toolkit for Modular, Multi-part Assembly. Lee ME, DeLoache, WC A, Cervantes B, Dueber, JE. ACS Synthetic Biology 2015 DOI: 10.1021/sb500366v. Journal .
Description
This collection contains a set of 96 standardized and characterized parts that can be used for bottom-up hierarchical assembly of single and multi-gene constructs for S. cerevisiae expression. The toolkit was deposited by John Dueber’s lab and contains characterized promoters, terminators, peptide tags, copy number machinery, and genome-editing tools. The hierarchical assembly scheme is based on the Golden Gate cloning technique, but it is also designed to be compatible with recombination based cloning such as yeast in vivo assembly, ligation independent cloning (SLIC) or Gibson Assembly. The design specifications of this collection also make constructs BioBrick-compatible. Use of this workflow allows for construction of multi-gene plasmids from PCR templates in three days.
Kit Documentation
Note from the depositor: We have noticed that some of the constructs are mildly toxic to E.coli (particularly those expressing fluorescent proteins), and will disappear from the population if a culture is passaged multiple times. The wells where we have noticed this issue are the following: A1, D11, E2, G11, G12, H1, H5, H6, H7, H11, H12. We suggest these be streaked onto solid media to pick fresh colonies every time. Conveniently, the fluorescent proteins themselves make it very easy to identify correct clones. Wells A1, D11, E2, H11, and H12 are green, while G11, G12, H1, H5, H6, H7 are red.
Documents describing this kit: YTK summary 128.0 KB
Download a ZIP file containing all MoClo-YTK plasmid sequences in GenBank format: YTK Genbank files 256.1 KB
How to Cite this Kit
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which they were created, and include Addgene in the Materials and Methods of your future publications.
For your Materials and Methods section:
“The MoClo-YTK plasmid kit was a gift from John Dueber (Addgene kit # 1000000061).”
For your Reference section:
A Highly-characterized Yeast Toolkit for Modular, Multi-part Assembly. Lee ME, DeLoache, WC A, Cervantes B, Dueber, JE. ACS Synthetic Biology 2015. DOI: 10.1021/sb500366v. Journal .
MoClo Yeast Toolkit - #1000000061
- Resistance Color Key
Each circle corresponds to a specific antibiotic resistance in the kit plate map wells.
- Inventory
Searchable and sortable table of all plasmids in kit. The Well column lists the plasmid well location in its plate. The Plasmid column links to a plasmid's individual web page.
- Kit Plate Map
96-well plate map for plasmid layout. Hovering over a well reveals the plasmid name, while clicking on a well opens the plasmid page.
Resistance Color Key
| Chloramphenicol | |
| Ampicillin | |
| Kanamycin | |
| Spectinomycin |
Inventory
| Well | Plasmid | Resistance |
|---|---|---|
| A / 1 | pYTK001 | Chloramphenicol |
| A / 2 | pYTK002 | Chloramphenicol |
| A / 3 | pYTK003 | Chloramphenicol |
| A / 4 | pYTK004 | Chloramphenicol |
| A / 5 | pYTK005 | Chloramphenicol |
| A / 6 | pYTK006 | Chloramphenicol |
| A / 7 | pYTK007 | Chloramphenicol |
| A / 8 | pYTK008 | Chloramphenicol |
| A / 9 | pYTK009 | Chloramphenicol |
| A / 10 | pYTK010 | Chloramphenicol |
| A / 11 | pYTK011 | Chloramphenicol |
| A / 12 | pYTK012 | Chloramphenicol |
| B / 1 | pYTK013 | Chloramphenicol |
| B / 2 | pYTK014 | Chloramphenicol |
| B / 3 | pYTK015 | Chloramphenicol |
| B / 4 | pYTK016 | Chloramphenicol |
| B / 5 | pYTK017 | Chloramphenicol |
| B / 6 | pYTK018 | Chloramphenicol |
| B / 7 | pYTK019 | Chloramphenicol |
| B / 8 | pYTK020 | Chloramphenicol |
| B / 9 | pYTK021 | Chloramphenicol |
| B / 10 | pYTK022 | Chloramphenicol |
| B / 11 | pYTK023 | Chloramphenicol |
| B / 12 | pYTK024 | Chloramphenicol |
| C / 1 | pYTK025 | Chloramphenicol |
| C / 2 | pYTK026 | Chloramphenicol |
| C / 3 | pYTK027 | Chloramphenicol |
| C / 4 | pYTK028 | Chloramphenicol |
| C / 5 | pYTK029 | Chloramphenicol |
| C / 6 | pYTK030 | Chloramphenicol |
| C / 7 | pYTK031 | Chloramphenicol |
| C / 8 | pYTK032 | Chloramphenicol |
| C / 9 | pYTK033 | Chloramphenicol |
| C / 10 | pYTK034 | Chloramphenicol |
| C / 11 | pYTK035 | Chloramphenicol |
| C / 12 | pYTK036 | Chloramphenicol |
| D / 1 | pYTK037 | Chloramphenicol |
| D / 2 | pYTK038 | Chloramphenicol |
| D / 3 | pYTK039 | Chloramphenicol |
| D / 4 | pYTK040 | Chloramphenicol |
| D / 5 | pYTK041 | Chloramphenicol |
| D / 6 | pYTK042 | Chloramphenicol |
| D / 7 | pYTK043 | Chloramphenicol |
| D / 8 | pYTK044 | Chloramphenicol |
| D / 9 | pYTK045 | Chloramphenicol |
| D / 10 | pYTK046 | Chloramphenicol |
| D / 11 | pYTK047 | Chloramphenicol |
| D / 12 | pYTK048 | Chloramphenicol |
| E / 1 | pYTK049 | Chloramphenicol |
| E / 2 | pYTK050 | Chloramphenicol |
| E / 3 | pYTK051 | Chloramphenicol |
| E / 4 | pYTK052 | Chloramphenicol |
| E / 5 | pYTK053 | Chloramphenicol |
| E / 6 | pYTK054 | Chloramphenicol |
| E / 7 | pYTK055 | Chloramphenicol |
| E / 8 | pYTK056 | Chloramphenicol |
| E / 9 | pYTK057 | Chloramphenicol |
| E / 10 | pYTK058 | Chloramphenicol |
| E / 11 | pYTK059 | Chloramphenicol |
| E / 12 | pYTK060 | Chloramphenicol |
| F / 1 | pYTK061 | Chloramphenicol |
| F / 2 | pYTK062 | Chloramphenicol |
| F / 3 | pYTK063 | Chloramphenicol |
| F / 4 | pYTK064 | Chloramphenicol |
| F / 5 | pYTK065 | Chloramphenicol |
| F / 6 | pYTK066 | Chloramphenicol |
| F / 7 | pYTK067 | Chloramphenicol |
| F / 8 | pYTK068 | Chloramphenicol |
| F / 9 | pYTK069 | Chloramphenicol |
| F / 10 | pYTK070 | Chloramphenicol |
| F / 11 | pYTK071 | Chloramphenicol |
| F / 12 | pYTK072 | Chloramphenicol |
| G / 1 | pYTK073 | Chloramphenicol |
| G / 2 | pYTK074 | Chloramphenicol |
| G / 3 | pYTK075 | Chloramphenicol |
| G / 4 | pYTK076 | Chloramphenicol |
| G / 5 | pYTK077 | Chloramphenicol |
| G / 6 | pYTK078 | Chloramphenicol |
| G / 7 | pYTK079 | Chloramphenicol |
| G / 8 | pYTK080 | Chloramphenicol |
| G / 9 | pYTK081 | Chloramphenicol |
| G / 10 | pYTK082 | Chloramphenicol |
| G / 11 | pYTK083 | Ampicillin |
| G / 12 | pYTK084 | Kanamycin |
| H / 1 | pYTK085 | Spectinomycin |
| H / 2 | pYTK086 | Chloramphenicol |
| H / 3 | pYTK087 | Chloramphenicol |
| H / 4 | pYTK088 | Chloramphenicol |
| H / 5 | pYTK089 | Ampicillin |
| H / 6 | pYTK090 | Kanamycin |
| H / 7 | pYTK091 | Spectinomycin |
| H / 8 | pYTK092 | Chloramphenicol |
| H / 9 | pYTK093 | Chloramphenicol |
| H / 10 | pYTK094 | Chloramphenicol |
| H / 11 | pYTK095 | Ampicillin |
| H / 12 | pYTK096 | Kanamycin |