pUC19 Citations (36)
Originally described in: Construction of improved M13 vectors using oligodeoxynucleotide-directed mutagenesis.Norrander J, Kempe T, Messing J Gene. 1983 Dec;26(1):101-6. PubMed Journal
Articles Citing pUC19
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| Rotavirus replication is correlated with S/G2 interphase arrest of the host cell cycle. Gluck S, Buttafuoco A, Meier AF, Arnoldi F, Vogt B, Schraner EM, Ackermann M, Eichwald C. PLoS One. 2017 Jun 16;12(6):e0179607. doi: 10.1371/journal.pone.0179607. eCollection 2017. PubMed |
| Genome-scale activation screen identifies a lncRNA locus regulating a gene neighbourhood. Joung J, Engreitz JM, Konermann S, Abudayyeh OO, Verdine VK, Aguet F, Gootenberg JS, Sanjana NE, Wright JB, Fulco CP, Tseng YY, Yoon CH, Boehm JS, Lander ES, Zhang F. Nature. 2017 Aug 11. doi: 10.1038/nature23451. PubMed |
| Feedback regulation of cytoneme-mediated transport shapes a tissue-specific FGF morphogen gradient. Du L, Sohr A, Yan G, Roy S. Elife. 2018 Oct 17;7. pii: 38137. doi: 10.7554/eLife.38137. PubMed |
| The ATG5-binding and coiled coil domains of ATG16L1 maintain autophagy and tissue homeostasis in mice independently of the WD domain required for LC3-associated phagocytosis. Rai S, Arasteh M, Jefferson M, Pearson T, Wang Y, Zhang W, Bicsak B, Divekar D, Powell PP, Naumann R, Beraza N, Carding SR, Florey O, Mayer U, Wileman T. Autophagy. 2019 Apr;15(4):599-612. doi: 10.1080/15548627.2018.1534507. Epub 2018 Nov 7. PubMed |
| Inhibiting the Evolution of Antibiotic Resistance. Ragheb MN, Thomason MK, Hsu C, Nugent P, Gage J, Samadpour AN, Kariisa A, Merrikh CN, Miller SI, Sherman DR, Merrikh H. Mol Cell. 2019 Jan 3;73(1):157-165.e5. doi: 10.1016/j.molcel.2018.10.015. Epub 2018 Nov 15. PubMed |
CRISPR-C: circularization of genes and chromosome by CRISPR in human cells.
Moller HD, Lin L, Xiang X, Petersen TS, Huang J, Yang L, Kjeldsen E, Jensen UB, Zhang X, Liu X, Xu X, Wang J, Yang H, Church GM, Bolund L, Regenberg B, Luo Y.
Nucleic Acids Res. 2018 Dec 14;46(22):e131. doi: 10.1093/nar/gky767.
PubMed
Associated Plasmids |
| CRISPR-Cas9 genome editing induces megabase-scale chromosomal truncations. Cullot G, Boutin J, Toutain J, Prat F, Pennamen P, Rooryck C, Teichmann M, Rousseau E, Lamrissi-Garcia I, Guyonnet-Duperat V, Bibeyran A, Lalanne M, Prouzet-Mauleon V, Turcq B, Ged C, Blouin JM, Richard E, Dabernat S, Moreau-Gaudry F, Bedel A. Nat Commun. 2019 Mar 8;10(1):1136. doi: 10.1038/s41467-019-09006-2. PubMed |
| FIP200 Claw Domain Binding to p62 Promotes Autophagosome Formation at Ubiquitin Condensates. Turco E, Witt M, Abert C, Bock-Bierbaum T, Su MY, Trapannone R, Sztacho M, Danieli A, Shi X, Zaffagnini G, Gamper A, Schuschnig M, Fracchiolla D, Bernklau D, Romanov J, Hartl M, Hurley JH, Daumke O, Martens S. Mol Cell. 2019 Apr 18;74(2):330-346.e11. doi: 10.1016/j.molcel.2019.01.035. Epub 2019 Mar 7. PubMed |
| LION: a simple and rapid method to achieve CRISPR gene editing. Xiang X, Luo L, Nodzynski M, Li C, Han P, Dou H, Petersen TS, Liang X, Pan X, Qu K, Yang L, Dang Y, Liu X, Bolund L, Zhang X, Tong G, Xing Y, Luo Y, Lin L. Cell Mol Life Sci. 2019 Jul;76(13):2633-2645. doi: 10.1007/s00018-019-03064-x. Epub 2019 Mar 18. PubMed |
| Redondoviridae, a Family of Small, Circular DNA Viruses of the Human Oro-Respiratory Tract Associated with Periodontitis and Critical Illness. Abbas AA, Taylor LJ, Dothard MI, Leiby JS, Fitzgerald AS, Khatib LA, Collman RG, Bushman FD. Cell Host Microbe. 2019 May 8;25(5):719-729.e4. doi: 10.1016/j.chom.2019.04.001. PubMed |
| Commensal Neisseria Kill Neisseria gonorrhoeae through a DNA-Dependent Mechanism. Kim WJ, Higashi D, Goytia M, Rendon MA, Pilligua-Lucas M, Bronnimann M, McLean JA, Duncan J, Trees D, Jerse AE, So M. Cell Host Microbe. 2019 Aug 14;26(2):228-239.e8. doi: 10.1016/j.chom.2019.07.003. Epub 2019 Aug 1. PubMed |
| Targeted gene therapy in human-induced pluripotent stem cells from a patient with primary hyperoxaluria type 1 using CRISPR/Cas9 technology. Esteve J, Blouin JM, Lalanne M, Azzi-Martin L, Dubus P, Bidet A, Harambat J, Llanas B, Moranvillier I, Bedel A, Moreau-Gaudry F, Richard E. Biochem Biophys Res Commun. 2019 Oct 1;517(4):677-683. doi: 10.1016/j.bbrc.2019.07.109. Epub 2019 Aug 8. PubMed |
A transient reporter for editing enrichment (TREE) in human cells.
Standage-Beier K, Tekel SJ, Brookhouser N, Schwarz G, Nguyen T, Wang X, Brafman DA.
Nucleic Acids Res. 2019 Aug 20. pii: 5552066. doi: 10.1093/nar/gkz713.
PubMed
Associated Plasmids |
| Nuclear Pores Assemble from Nucleoporin Condensates During Oogenesis. Hampoelz B, Schwarz A, Ronchi P, Bragulat-Teixidor H, Tischer C, Gaspar I, Ephrussi A, Schwab Y, Beck M. Cell. 2019 Oct 17;179(3):671-686.e17. doi: 10.1016/j.cell.2019.09.022. PubMed |
| Haplotyping by CRISPR-mediated DNA circularization (CRISPR-hapC) broadens allele-specific gene editing. Yu J, Xiang X, Huang J, Liang X, Pan X, Dong Z, Petersen TS, Qu K, Yang L, Zhao X, Li S, Zheng T, Xu Z, Liu C, Han P, Xu F, Yang H, Liu X, Zhang X, Bolund L, Luo Y, Lin L. Nucleic Acids Res. 2020 Mar 18;48(5):e25. doi: 10.1093/nar/gkz1233. PubMed |
| Capturing the primordial Kras mutation initiating urethane carcinogenesis. Li S, MacAlpine DM, Counter CM. Nat Commun. 2020 Apr 14;11(1):1800. doi: 10.1038/s41467-020-15660-8. PubMed |
| Protocol for the Generation of Human Pluripotent Reporter Cell Lines Using CRISPR/Cas9. Zhong A, Li M, Zhou T. STAR Protoc. 2020 Sep 18;1(2). doi: 10.1016/j.xpro.2020.100052. Epub 2020 Jun 13. PubMed |
| Antioxidant and Cytoprotective Potential of the Essential Oil Pistacia lentiscus var. chia and Its Major Components Myrcene and alpha-Pinene. Xanthis V, Fitsiou E, Voulgaridou GP, Bogadakis A, Chlichlia K, Galanis A, Pappa A. Antioxidants (Basel). 2021 Jan 18;10(1). pii: antiox10010127. doi: 10.3390/antiox10010127. PubMed |
| CALM supports clathrin-coated vesicle completion upon membrane tension increase. Willy NM, Colombo F, Huber S, Smith AC, Norton EG, Kural C, Cocucci E. Proc Natl Acad Sci U S A. 2021 Jun 22;118(25). pii: 2010438118. doi: 10.1073/pnas.2010438118. PubMed |
| Anti-tumor immunity in mismatch repair-deficient colorectal cancers requires type I IFN-driven CCL5 and CXCL10. Mowat C, Mosley SR, Namdar A, Schiller D, Baker K. J Exp Med. 2021 Sep 6;218(9). pii: 212506. doi: 10.1084/jem.20210108. Epub 2021 Jul 23. PubMed |
One-shot identification of SARS-CoV-2 S RBD escape mutants using yeast screening.
Francino-Urdaniz IM, Steiner PJ, Kirby MB, Zhao F, Haas CM, Barman S, Rhodes ER, Leonard AC, Peng L, Sprenger KG, Jardine JG, Whitehead TA.
Cell Rep. 2021 Aug 31;36(9):109627. doi: 10.1016/j.celrep.2021.109627. Epub 2021 Aug 10.
PubMed
Associated Plasmids |
| SEC23A rescues SEC23B-deficient congenital dyserythropoietic anemia type II. King R, Lin Z, Balbin-Cuesta G, Myers G, Friedman A, Zhu G, McGee B, Saunders TL, Kurita R, Nakamura Y, Engel JD, Reddy P, Khoriaty R. Sci Adv. 2021 Nov 26;7(48):eabj5293. doi: 10.1126/sciadv.abj5293. Epub 2021 Nov 24. PubMed |
| Overcoming Microenvironment-Mediated Chemoprotection through Stromal Galectin-3 Inhibition in Acute Lymphoblastic Leukemia. Tarighat SS, Fei F, Joo EJ, Abdel-Azim H, Yang L, Geng H, Bum-Erdene K, Grice ID, von Itzstein M, Blanchard H, Heisterkamp N. Int J Mol Sci. 2021 Nov 10;22(22). pii: ijms222212167. doi: 10.3390/ijms222212167. PubMed |
| CTCF-mediated chromatin looping provides a topological framework for the formation of phase-separated transcriptional condensates. Lee R, Kang MK, Kim YJ, Yang B, Shim H, Kim S, Kim K, Yang CM, Min BG, Jung WJ, Lee EC, Joo JS, Park G, Cho WK, Kim HP. Nucleic Acids Res. 2022 Jan 11;50(1):207-226. doi: 10.1093/nar/gkab1242. PubMed |
| Systematic comparison of CRISPR-based transcriptional activators uncovers gene-regulatory features of enhancer-promoter interactions. Wang K, Escobar M, Li J, Mahata B, Goell J, Shah S, Cluck M, Hilton IB. Nucleic Acids Res. 2022 Aug 12;50(14):7842-7855. doi: 10.1093/nar/gkac582. PubMed |
| FERARI and cargo adaptors coordinate cargo flow through sorting endosomes. Solinger JA, Rashid HO, Spang A. Nat Commun. 2022 Aug 8;13(1):4620. doi: 10.1038/s41467-022-32377-y. PubMed |
Efficient plasmid transfer via natural competence in a microbial co-culture.
Cheng YY, Zhou Z, Papadopoulos JM, Zuke JD, Falbel TG, Anantharaman K, Burton BM, Venturelli OS.
Mol Syst Biol. 2023 Mar 9;19(3):e11406. doi: 10.15252/msb.202211406. Epub 2023 Jan 30.
PubMed
Associated Plasmids |
| MND1 enables homologous recombination in somatic cells primarily outside the context of replication. Koob L, Friskes A, van Bergen L, Feringa FM, van den Broek B, Koeleman ES, van Beek E, Schubert M, Blomen VA, Brummelkamp TR, Krenning L, Medema RH. Mol Oncol. 2023 Jul;17(7):1192-1211. doi: 10.1002/1878-0261.13448. Epub 2023 Jun 14. PubMed |
| PINE-TREE enables highly efficient genetic modification of human cell lines. Frisch C, Kostes WW, Galyon B, Whitman B, Tekel SJ, Standage-Beier K, Srinivasan G, Wang X, Brafman DA. Mol Ther Nucleic Acids. 2023 Jul 17;33:483-492. doi: 10.1016/j.omtn.2023.07.007. eCollection 2023 Sep 12. PubMed |
| The Egg-Counter: A novel microfluidic platform for characterization of Caenorhabditis elegans egg-laying. Banse SA, Jarrett CM, Robinson KJ, Blue BW, Shaw EL, Phillips PC. bioRxiv [Preprint]. 2023 Sep 4:2023.09.01.555781. doi: 10.1101/2023.09.01.555781. PubMed |
| Modeling the consequences of age-linked rDNA hypermethylation with dCas9-directed DNA methylation in human cells. Blokhina Y, Buchwalter A. bioRxiv [Preprint]. 2023 Nov 1:2023.10.18.562830. doi: 10.1101/2023.10.18.562830. PubMed |
| Temporal dynamics and stoichiometry in human Notch signaling from Notch synaptic complex formation to nuclear entry of the Notch intracellular domain. Tveriakhina L, Scanavachi G, Egan ED, Da Cunha Correia RB, Martin AP, Rogers JM, Yodh JS, Aster JC, Kirchhausen T, Blacklow SC. Dev Cell. 2024 Jun 3;59(11):1425-1438.e8. doi: 10.1016/j.devcel.2024.03.021. Epub 2024 Apr 3. PubMed |
| Protocol for efficient CRISPR-Cas9-mediated fluorescent tag knockin in hard-to-transfect erythroid cell lines. Deleuze V, Soler E, Andrieu-Soler C. STAR Protoc. 2024 Jun 21;5(2):103016. doi: 10.1016/j.xpro.2024.103016. Epub 2024 Apr 17. PubMed |
| The egg-counter: a novel microfluidic platform for characterization of Caenorhabditis elegans egg-laying. Banse SA, Jarrett CM, Robinson KJ, Blue BW, Shaw EL, Phillips PC. Lab Chip. 2024 May 28;24(11):2975-2986. doi: 10.1039/d3lc01073b. PubMed |
| Genetic Knock-Ins of Endogenous Fluorescent Tags in RAW 264.7 Murine Macrophages Using CRISPR/Cas9 Genome Editing. Naigles B, Soroczynski J, Hao N. Bio Protoc. 2024 Mar 20;14(6):e4960. doi: 10.21769/BioProtoc.4960. eCollection 2024 Mar 20. PubMed |
| Mitochondrial Calcium Signaling Regulates Branched-Chain Amino Acid Catabolism in Fibrolamellar Carcinoma. Marsh NM, MacEwen MJS, Chea J, Kenerson HL, Kwong AA, Locke TM, Miralles FJ, Sapre T, Gozali N, Atilla-Gokcumen GE, Ong SE, Scott JD, Yeung RS, Sancak Y. bioRxiv [Preprint]. 2024 May 28:2024.05.27.596106. doi: 10.1101/2024.05.27.596106. PubMed |
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