p426-SNR52p-gRNA.CAN1.Y-SUP4t Citations (55)
Originally described in: Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems.Dicarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GM. Nucleic Acids Res PubMed Journal
Articles Citing p426-SNR52p-gRNA.CAN1.Y-SUP4t
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| A CRISPR-based approach for proteomic analysis of a single genomic locus. Waldrip ZJ, Byrum SD, Storey AJ, Gao J, Byrd AK, Mackintosh SG, Wahls WP, Taverna SD, Raney KD, Tackett AJ. Epigenetics. 2014 Sep;9(9):1207-11. doi: 10.4161/epi.29919. Epub 2014 Jul 18. PubMed |
| Multiplex metabolic pathway engineering using CRISPR/Cas9 in Saccharomyces cerevisiae. Jakociunas T, Bonde I, Herrgard M, Harrison SJ, Kristensen M, Pedersen LE, Jensen MK, Keasling JD. Metab Eng. 2015 Mar;28:213-22. doi: 10.1016/j.ymben.2015.01.008. Epub 2015 Jan 28. PubMed |
CRISPR/Cas9: a molecular Swiss army knife for simultaneous introduction of multiple genetic modifications in Saccharomyces cerevisiae.
Mans R, van Rossum HM, Wijsman M, Backx A, Kuijpers NG, van den Broek M, Daran-Lapujade P, Pronk JT, van Maris AJ, Daran JM.
FEMS Yeast Res. 2015 Mar;15(2). pii: fov004. doi: 10.1093/femsyr/fov004. Epub 2015 Mar 4.
PubMed
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| Development of the CRISPR/Cas9 System for Targeted Gene Disruption in Aspergillus fumigatus. Fuller KK, Chen S, Loros JJ, Dunlap JC. Eukaryot Cell. 2015 Nov;14(11):1073-80. doi: 10.1128/EC.00107-15. Epub 2015 Aug 28. PubMed |
| In-Yeast Engineering of a Bacterial Genome Using CRISPR/Cas9. Tsarmpopoulos I, Gourgues G, Blanchard A, Vashee S, Jores J, Lartigue C, Sirand-Pugnet P. ACS Synth Biol. 2016 Jan 15;5(1):104-9. doi: 10.1021/acssynbio.5b00196. Epub 2015 Dec 7. PubMed |
| CasHRA (Cas9-facilitated Homologous Recombination Assembly) method of constructing megabase-sized DNA. Zhou J, Wu R, Xue X, Qin Z. Nucleic Acids Res. 2016 May 24. pii: gkw475. PubMed |
| CRISPR-PCS: a powerful new approach to inducing multiple chromosome splitting in Saccharomyces cerevisiae. Sasano Y, Nagasawa K, Kaboli S, Sugiyama M, Harashima S. Sci Rep. 2016 Aug 17;6:30278. doi: 10.1038/srep30278. PubMed |
| Towards the exploitation of glycerol's high reducing power in Saccharomyces cerevisiae-based bioprocesses. Klein M, Carrillo M, Xiberras J, Islam ZU, Swinnen S, Nevoigt E. Metab Eng. 2016 Nov;38:464-472. doi: 10.1016/j.ymben.2016.10.008. Epub 2016 Oct 14. PubMed |
| Cloning and Functional Characterization of Cycloartenol Synthase from the Red Seaweed Laurencia dendroidea. Calegario G, Pollier J, Arendt P, de Oliveira LS, Thompson C, Soares AR, Pereira RC, Goossens A, Thompson FL. PLoS One. 2016 Nov 10;11(11):e0165954. doi: 10.1371/journal.pone.0165954. eCollection 2016. PubMed |
| Plant cholesterol biosynthetic pathway overlaps with phytosterol metabolism. Sonawane PD, Pollier J, Panda S, Szymanski J, Massalha H, Yona M, Unger T, Malitsky S, Arendt P, Pauwels L, Almekias-Siegl E, Rogachev I, Meir S, Cardenas PD, Masri A, Petrikov M, Schaller H, Schaffer AA, Kamble A, Giri AP, Goossens A, Aharoni A. Nat Plants. 2016 Dec 22;3:16205. doi: 10.1038/nplants.2016.205. PubMed |
| AssemblX: a user-friendly toolkit for rapid and reliable multi-gene assemblies. Hochrein L, Machens F, Gremmels J, Schulz K, Messerschmidt K, Mueller-Roeber B. Nucleic Acids Res. 2017 Jun 2;45(10):e80. doi: 10.1093/nar/gkx034. PubMed |
| The ancient CYP716 family is a major contributor to the diversification of eudicot triterpenoid biosynthesis. Miettinen K, Pollier J, Buyst D, Arendt P, Csuk R, Sommerwerk S, Moses T, Mertens J, Sonawane PD, Pauwels L, Aharoni A, Martins J, Nelson DR, Goossens A. Nat Commun. 2017 Feb 6;8:14153. doi: 10.1038/ncomms14153. PubMed |
| SWITCH: a dynamic CRISPR tool for genome engineering and metabolic pathway control for cell factory construction in Saccharomyces cerevisiae. Vanegas KG, Lehka BJ, Mortensen UH. Microb Cell Fact. 2017 Feb 8;16(1):25. doi: 10.1186/s12934-017-0632-x. PubMed |
| Hsp104 disaggregase at normal levels cures many [PSI(+)] prion variants in a process promoted by Sti1p, Hsp90, and Sis1p. Gorkovskiy A, Reidy M, Masison DC, Wickner RB. Proc Natl Acad Sci U S A. 2017 May 23;114(21):E4193-E4202. doi: 10.1073/pnas.1704016114. Epub 2017 May 8. PubMed |
| Efficient genome editing by CRISPR/Cas9 with a tRNA-sgRNA fusion in the methylotrophic yeast Ogataea polymorpha. Numamoto M, Maekawa H, Kaneko Y. J Biosci Bioeng. 2017 Jun 27. pii: S1389-1723(17)30214-1. doi: 10.1016/j.jbiosc.2017.06.001. PubMed |
| Method for Multiplexing CRISPR/Cas9 in Saccharomyces cerevisiae Using Artificial Target DNA Sequences. Giersch RM, Finnigan GC. Bio Protoc. 2017 Sep 20;7(18). doi: 10.21769/BioProtoc.2557. PubMed |
| Synthetic Promoters and Transcription Factors for Heterologous Protein Expression in Saccharomyces cerevisiae. Machens F, Balazadeh S, Mueller-Roeber B, Messerschmidt K. Front Bioeng Biotechnol. 2017 Oct 19;5:63. doi: 10.3389/fbioe.2017.00063. eCollection 2017. PubMed |
Rapid and Efficient CRISPR/Cas9-Based Mating-Type Switching of Saccharomyces cerevisiae.
Xie ZX, Mitchell LA, Liu HM, Li BZ, Liu D, Agmon N, Wu Y, Li X, Zhou X, Li B, Xiao WH, Ding MZ, Wang Y, Yuan YJ, Boeke JD.
G3 (Bethesda). 2018 Jan 4;8(1):173-183. doi: 10.1534/g3.117.300347.
PubMed
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A highly specific SpCas9 variant is identified by in vivo screening in yeast.
Casini A, Olivieri M, Petris G, Montagna C, Reginato G, Maule G, Lorenzin F, Prandi D, Romanel A, Demichelis F, Inga A, Cereseto A.
Nat Biotechnol. 2018 Jan 29. pii: nbt.4066. doi: 10.1038/nbt.4066.
PubMed
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| Altered access to beneficial mutations slows adaptation and biases fixed mutations in diploids. Marad DA, Buskirk SW, Lang GI. Nat Ecol Evol. 2018 May;2(5):882-889. doi: 10.1038/s41559-018-0503-9. Epub 2018 Mar 26. PubMed |
| Locus specific engineering of tandem DNA repeats in the genome of Saccharomyces cerevisiae using CRISPR/Cas9 and overlapping oligonucleotides. Lancrey A, Joubert A, Boule JB. Sci Rep. 2018 May 8;8(1):7127. doi: 10.1038/s41598-018-25508-3. PubMed |
| Engineering de novo anthocyanin production in Saccharomyces cerevisiae. Levisson M, Patinios C, Hein S, de Groot PA, Daran JM, Hall RD, Martens S, Beekwilder J. Microb Cell Fact. 2018 Jul 3;17(1):103. doi: 10.1186/s12934-018-0951-6. PubMed |
| Creating a functional single-chromosome yeast. Shao Y, Lu N, Wu Z, Cai C, Wang S, Zhang LL, Zhou F, Xiao S, Liu L, Zeng X, Zheng H, Yang C, Zhao Z, Zhao G, Zhou JQ, Xue X, Qin Z. Nature. 2018 Aug;560(7718):331-335. doi: 10.1038/s41586-018-0382-x. Epub 2018 Aug 1. PubMed |
Double Selection Enhances the Efficiency of Target-AID and Cas9-Based Genome Editing in Yeast.
Despres PC, Dube AK, Nielly-Thibault L, Yachie N, Landry CR.
G3 (Bethesda). 2018 Oct 3;8(10):3163-3171. doi: 10.1534/g3.118.200461.
PubMed
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| CRISPR-Cas genome engineering of esterase activity in Saccharomyces cerevisiae steers aroma formation. Dank A, Smid EJ, Notebaart RA. BMC Res Notes. 2018 Sep 27;11(1):682. doi: 10.1186/s13104-018-3788-5. PubMed |
| Genomic and phenotypic characterization of a refactored xylose-utilizing Saccharomyces cerevisiae strain for lignocellulosic biofuel production. Tran Nguyen Hoang P, Ko JK, Gong G, Um Y, Lee SM. Biotechnol Biofuels. 2018 Sep 29;11:268. doi: 10.1186/s13068-018-1269-7. eCollection 2018. PubMed |
| Heat-stress triggers MAPK crosstalk to turn on the hyperosmotic response pathway. Dunayevich P, Baltanas R, Clemente JA, Couto A, Sapochnik D, Vasen G, Colman-Lerner A. Sci Rep. 2018 Oct 11;8(1):15168. doi: 10.1038/s41598-018-33203-6. PubMed |
| Contribution of Eat1 and Other Alcohol Acyltransferases to Ester Production in Saccharomyces cerevisiae. Kruis AJ, Gallone B, Jonker T, Mars AE, van Rijswijck IMH, Wolkers-Rooijackers JCM, Smid EJ, Steensels J, Verstrepen KJ, Kengen SWM, van der Oost J, Weusthuis RA. Front Microbiol. 2018 Dec 21;9:3202. doi: 10.3389/fmicb.2018.03202. eCollection 2018. PubMed |
| Expansion and Diversification of MFS Transporters in Kluyveromyces marxianus. Varela JA, Puricelli M, Montini N, Morrissey JP. Front Microbiol. 2019 Jan 10;9:3330. doi: 10.3389/fmicb.2018.03330. eCollection 2018. PubMed |
| Creating functional chromosome fusions in yeast with CRISPR-Cas9. Shao Y, Lu N, Xue X, Qin Z. Nat Protoc. 2019 Aug;14(8):2521-2545. doi: 10.1038/s41596-019-0192-0. Epub 2019 Jul 12. PubMed |
| Production of 14alpha-hydroxysteroids by a recombinant Saccharomyces cerevisiae biocatalyst expressing of a fungal steroid 14alpha-hydroxylation system. Chen J, Tang J, Xi Y, Dai Z, Bi C, Chen X, Fan F, Zhang X. Appl Microbiol Biotechnol. 2019 Oct;103(20):8363-8374. doi: 10.1007/s00253-019-10076-x. Epub 2019 Aug 14. PubMed |
| CRISPR-PCD and CRISPR-PCRep: Two novel technologies for simultaneous multiple segmental chromosomal deletion/replacement in Saccharomyces cerevisiae. Easmin F, Sasano Y, Kimura S, Hassan N, Ekino K, Taguchi H, Harashima S. J Biosci Bioeng. 2020 Feb;129(2):129-139. doi: 10.1016/j.jbiosc.2019.08.004. Epub 2019 Oct 1. PubMed |
| Identification of Absidia orchidis steroid 11beta-hydroxylation system and its application in engineering Saccharomyces cerevisiae for one-step biotransformation to produce hydrocortisone. Chen J, Fan F, Qu G, Tang J, Xi Y, Bi C, Sun Z, Zhang X. Metab Eng. 2020 Jan;57:31-42. doi: 10.1016/j.ymben.2019.10.006. Epub 2019 Oct 24. PubMed |
| Improved simultaneous co-fermentation of glucose and xylose by Saccharomyces cerevisiae for efficient lignocellulosic biorefinery. Hoang Nguyen Tran P, Ko JK, Gong G, Um Y, Lee SM. Biotechnol Biofuels. 2020 Jan 22;13:12. doi: 10.1186/s13068-019-1641-2. eCollection 2020. PubMed |
| Engineering chimeric diterpene synthases and isoprenoid biosynthetic pathways enables high-level production of miltiradiene in yeast. Hu T, Zhou J, Tong Y, Su P, Li X, Liu Y, Liu N, Wu X, Zhang Y, Wang J, Gao L, Tu L, Lu Y, Jiang Z, Zhou YJ, Gao W, Huang L. Metab Eng. 2020 Jul;60:87-96. doi: 10.1016/j.ymben.2020.03.011. Epub 2020 Apr 5. PubMed |
| Engineering Saccharomyces cerevisiae for production of the valuable monoterpene d-limonene during Chinese Baijiu fermentation. Hu Z, Lin L, Li H, Li P, Weng Y, Zhang C, Yu A, Xiao D. J Ind Microbiol Biotechnol. 2020 Jul;47(6-7):511-523. doi: 10.1007/s10295-020-02284-6. Epub 2020 Jun 3. PubMed |
| The evolution of coexistence from competition in experimental co-cultures of Escherichia coli and Saccharomyces cerevisiae. Barber JN, Sezmis AL, Woods LC, Anderson TD, Voss JM, McDonald MJ. ISME J. 2021 Mar;15(3):746-761. doi: 10.1038/s41396-020-00810-z. Epub 2020 Oct 22. PubMed |
| Improve the production of D-limonene by regulating the mevalonate pathway of Saccharomyces cerevisiae during alcoholic beverage fermentation. Hu Z, Li H, Weng Y, Li P, Zhang C, Xiao D. J Ind Microbiol Biotechnol. 2020 Dec;47(12):1083-1097. doi: 10.1007/s10295-020-02329-w. Epub 2020 Nov 15. PubMed |
| Engineered yeast genomes accurately assembled from pure and mixed samples. Collins JH, Keating KW, Jones TR, Balaji S, Marsan CB, Como M, Newlon ZJ, Mitchell T, Bartley B, Adler A, Roehner N, Young EM. Nat Commun. 2021 Mar 5;12(1):1485. doi: 10.1038/s41467-021-21656-9. PubMed |
| PCR-mediated One-day Synthesis of Guide RNA for the CRISPR/Cas9 System. Hassan N, Easmin F, Ekino K, Harashima S. Bio Protoc. 2021 Jul 5;11(13):e4082. doi: 10.21769/BioProtoc.4082. eCollection 2021 Jul 5. PubMed |
| Artificial Transcription Factors for Tuneable Gene Expression in Pichia pastoris. Naseri G, Prause K, Hamdo HH, Arenz C. Front Bioeng Biotechnol. 2021 Aug 9;9:676900. doi: 10.3389/fbioe.2021.676900. eCollection 2021. PubMed |
| Metabolic engineering of Saccharomyces cerevisiae for gram-scale diosgenin production. Xu L, Wang D, Chen J, Li B, Li Q, Liu P, Qin Y, Dai Z, Fan F, Zhang X. Metab Eng. 2022 Mar;70:115-128. doi: 10.1016/j.ymben.2022.01.013. Epub 2022 Jan 24. PubMed |
| Computationally designed hyperactive Cas9 enzymes. Vos PD, Rossetti G, Mantegna JL, Siira SJ, Gandadireja AP, Bruce M, Raven SA, Khersonsky O, Fleishman SJ, Filipovska A, Rackham O. Nat Commun. 2022 May 31;13(1):3023. doi: 10.1038/s41467-022-30598-9. PubMed |
Cytosine base editing systems with minimized off-target effect and molecular size.
Li A, Mitsunobu H, Yoshioka S, Suzuki T, Kondo A, Nishida K.
Nat Commun. 2022 Aug 8;13(1):4531. doi: 10.1038/s41467-022-32157-8.
PubMed
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| Polygenic Analysis of Tolerance to Carbon Dioxide Inhibition of Isoamyl Acetate "Banana" Flavor Production in Yeast Reveals MDS3 as Major Causative Gene. Souffriau B, Holt S, Hagman A, De Graeve S, Malcorps P, Foulquie-Moreno MR, Thevelein JM. Appl Environ Microbiol. 2022 Sep 22;88(18):e0081422. doi: 10.1128/aem.00814-22. Epub 2022 Sep 8. PubMed |
An enChIP system for the analysis of genome functions in budding yeast.
Fujii H, Fujita T.
Biol Methods Protoc. 2022 Oct 17;7(1):bpac025. doi: 10.1093/biomethods/bpac025. eCollection 2022.
PubMed
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Genome-wide base editor screen identifies regulators of protein abundance in yeast.
Schubert OT, Bloom JS, Sadhu MJ, Kruglyak L.
Elife. 2022 Nov 3;11. pii: 79525. doi: 10.7554/eLife.79525.
PubMed
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| Construction and evaluation of gRNA arrays for multiplex CRISPR-Cas9. Zun G, Dobersek K, Petrovic U. Yeast. 2023 Jan;40(1):32-41. doi: 10.1002/yea.3833. Epub 2023 Jan 6. PubMed |
| Design of Four Small-Molecule-Inducible Systems in the Yeast Chromosome, Applied to Optimize Terpene Biosynthesis. Park JH, Bassalo MC, Lin GM, Chen Y, Doosthosseini H, Schmitz J, Roubos JA, Voigt CA. ACS Synth Biol. 2023 Apr 21;12(4):1119-1132. doi: 10.1021/acssynbio.2c00607. Epub 2023 Mar 21. PubMed |
CREEPY: CRISPR-mediated editing of synthetic episomes in yeast.
Zhao Y, Coelho C, Lauer S, Majewski M, Laurent JM, Brosh R, Boeke JD.
Nucleic Acids Res. 2023 Jun 16:gkad491. doi: 10.1093/nar/gkad491.
PubMed
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| Comparative analyses of disease-linked missense mutations in the RNA exosome modeled in budding yeast reveal distinct functional consequences in translation. Sterrett MC, Cureton LA, Cohen LN, van Hoof A, Khoshnevis S, Fasken MB, Corbett AH, Ghalei H. bioRxiv [Preprint]. 2023 Oct 19:2023.10.18.562946. doi: 10.1101/2023.10.18.562946. PubMed |
| Potency of CRISPR-Cas Antifungals Is Enhanced by Cotargeting DNA Repair and Growth Regulatory Machinery at the Genetic Level. Mendoza BJ, Zheng X, Clements JC, Cotter C, Trinh CT. ACS Infect Dis. 2023 Dec 8;9(12):2494-2503. doi: 10.1021/acsinfecdis.3c00342. Epub 2023 Nov 13. PubMed |
| A Biallelic Variant of the RNA Exosome Gene EXOSC4 Causes Translational Defects Associated with a Neurodevelopmental Disorder. Fasken MB, Leung SW, Cureton LA, Al-Awadi M, Al-Kindy A, Khoshnevis S, Ghalei H, Al-Maawali A, Corbett AH. medRxiv [Preprint]. 2023 Oct 28:2023.10.24.23297197. doi: 10.1101/2023.10.24.23297197. PubMed |
| A toolbox for manipulating the genome of the major goat pathogen, Mycoplasma capricolum subsp. capripneumoniae. Gourgues G, Manso-Silvan L, Chamberland C, Sirand-Pugnet P, Thiaucourt F, Blanchard A, Baby V, Lartigue C. Microbiology (Reading). 2024 Jan;170(1):001423. doi: 10.1099/mic.0.001423. PubMed |
| Eukaryotic-driven directed evolution of Cas9 nucleases. Ruta GV, Ciciani M, Kheir E, Gentile MD, Amistadi S, Casini A, Cereseto A. Genome Biol. 2024 Mar 25;25(1):79. doi: 10.1186/s13059-024-03215-9. PubMed |
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