V5-TurboID-NES_pCDNA3 Citations (29)
Originally described in: Efficient proximity labeling in living cells and organisms with TurboID.Branon TC, Bosch JA, Sanchez AD, Udeshi ND, Svinkina T, Carr SA, Feldman JL, Perrimon N, Ting AY Nat Biotechnol. 2018 Aug 20. pii: nbt.4201. doi: 10.1038/nbt.4201. PubMed Journal
Articles Citing V5-TurboID-NES_pCDNA3
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Proximity labeling of protein complexes and cell type-specific organellar proteomes in Arabidopsis enabled by TurboID.
Mair A, Xu SL, Branon TC, Ting AY, Bergmann DC.
Elife. 2019 Sep 19;8. pii: 47864. doi: 10.7554/eLife.47864.
PubMed
Associated Plasmids |
| Establishment of Proximity-Dependent Biotinylation Approaches in Different Plant Model Systems. Arora D, Abel NB, Liu C, Van Damme P, Yperman K, Eeckhout D, Vu LD, Wang J, Tornkvist A, Impens F, Korbei B, Van Leene J, Goossens A, De Jaeger G, Ott T, Moschou PN, Van Damme D. Plant Cell. 2020 Nov;32(11):3388-3407. doi: 10.1105/tpc.20.00235. Epub 2020 Aug 25. PubMed |
Chemico-genetic discovery of astrocytic control of inhibition in vivo.
Takano T, Wallace JT, Baldwin KT, Purkey AM, Uezu A, Courtland JL, Soderblom EJ, Shimogori T, Maness PF, Eroglu C, Soderling SH.
Nature. 2020 Dec;588(7837):296-302. doi: 10.1038/s41586-020-2926-0. Epub 2020 Nov 11.
PubMed
Associated Plasmids |
| A ubiquitin ligase mediates target-directed microRNA decay independently of tailing and trimming. Han J, LaVigne CA, Jones BT, Zhang H, Gillett F, Mendell JT. Science. 2020 Dec 18;370(6523). pii: science.abc9546. doi: 10.1126/science.abc9546. Epub 2020 Nov 12. PubMed |
Quantitative Interactomics of Lck-TurboID in Living Human T Cells Unveils T Cell Receptor Stimulation-Induced Proximal Lck Interactors.
Chua XY, Aballo T, Elnemer W, Tran M, Salomon A.
J Proteome Res. 2020 Nov 13. doi: 10.1021/acs.jproteome.0c00616.
PubMed
Associated Plasmids |
| Cell type-selective secretome profiling in vivo. Wei W, Riley NM, Yang AC, Kim JT, Terrell SM, Li VL, Garcia-Contreras M, Bertozzi CR, Long JZ. Nat Chem Biol. 2021 Mar;17(3):326-334. doi: 10.1038/s41589-020-00698-y. Epub 2020 Nov 16. PubMed |
Reticulon-3 Promotes Endosome Maturation at ER Membrane Contact Sites.
Wu H, Voeltz GK.
Dev Cell. 2021 Jan 11;56(1):52-66.e7. doi: 10.1016/j.devcel.2020.12.014.
PubMed
Associated Plasmids |
| STAU2 protein level is controlled by caspases and the CHK1 pathway and regulates cell cycle progression in the non-transformed hTERT-RPE1 cells. Conde L, Gonzalez Quesada Y, Bonnet-Magnaval F, Beaujois R, DesGroseillers L. BMC Mol Cell Biol. 2021 Mar 4;22(1):16. doi: 10.1186/s12860-021-00352-y. PubMed |
| Identification of the Bok Interactome Using Proximity Labeling. Szczesniak LM, Bonzerato CG, Wojcikiewicz RJH. Front Cell Dev Biol. 2021 May 31;9:689951. doi: 10.3389/fcell.2021.689951. eCollection 2021. PubMed |
| BRD9 is a druggable component of interferon-stimulated gene expression and antiviral activity. Borold J, Eletto D, Busnadiego I, Mair NK, Moritz E, Schiefer S, Schmidt N, Petric PP, Wong WW, Schwemmle M, Hale BG. EMBO Rep. 2021 Oct 5;22(10):e52823. doi: 10.15252/embr.202152823. Epub 2021 Aug 16. PubMed |
In vivo proximity biotin ligation identifies the interactome of Egalitarian, a Dynein cargo adaptor.
Baker FC, Neiswender H, Veeranan-Karmegam R, Gonsalvez GB.
Development. 2021 Nov 15;148(22). pii: 273472. doi: 10.1242/dev.199935. Epub 2021 Nov 18.
PubMed
Associated Plasmids |
| DFNA5 regulates immune cells infiltration and exhaustion. Hu J, Pei W, Jiang M, Huang Y, Dong F, Jiang Z, Xu Y, Li Z. Cancer Cell Int. 2022 Mar 5;22(1):107. doi: 10.1186/s12935-022-02487-0. PubMed |
| Cell type-specific biotin labeling in vivo resolves regional neuronal and astrocyte proteomic differences in mouse brain. Rayaprolu S, Bitarafan S, Santiago JV, Betarbet R, Sunna S, Cheng L, Xiao H, Nelson RS, Kumar P, Bagchi P, Duong DM, Goettemoeller AM, Olah VJ, Rowan M, Levey AI, Wood LB, Seyfried NT, Rangaraju S. Nat Commun. 2022 May 25;13(1):2927. doi: 10.1038/s41467-022-30623-x. PubMed |
| Histone methyltransferase Dot1L recruits O-GlcNAc transferase to target chromatin sites to regulate histone O-GlcNAcylation. Xu B, Zhang C, Jiang A, Zhang X, Liang F, Wang X, Li D, Liu C, Liu X, Xia J, Li Y, Wang Y, Yang Z, Chen J, Zhou Y, Chen L, Sun H. J Biol Chem. 2022 Jul;298(7):102115. doi: 10.1016/j.jbc.2022.102115. Epub 2022 Jun 9. PubMed |
| An Rtn4/Nogo-A-interacting micropeptide modulates synaptic plasticity with age. Kragness S, Clark Z, Mullin A, Guidry J, Earls LR. PLoS One. 2022 Jun 30;17(6):e0269404. doi: 10.1371/journal.pone.0269404. eCollection 2022. PubMed |
Coronin 1C restricts endosomal branched actin to organize ER contact and endosome fission.
Striepen JF, Voeltz GK.
J Cell Biol. 2022 Aug 1;221(8). pii: 213342. doi: 10.1083/jcb.202110089. Epub 2022 Jul 8.
PubMed
Associated Plasmids |
| A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation. Gonzalez Quesada Y, DesGroseillers L. Int J Mol Sci. 2022 Sep 30;23(19):11588. doi: 10.3390/ijms231911588. PubMed |
An ER phospholipid hydrolase drives ER-associated mitochondrial constriction for fission and fusion.
Nguyen TT, Voeltz GK.
Elife. 2022 Nov 30;11:e84279. doi: 10.7554/eLife.84279.
PubMed
Associated Plasmids |
| Proximity proteomics reveals role of Abelson interactor 1 in the regulation of TAK1/RIPK1 signaling. Petersen M, Chorzalska A, Pardo M, Rodriguez A, Morgan J, Ahsan N, Zhao TC, Liang O, Kotula L, Bertone P, Gruppuso PA, Dubielecka PM. Mol Oncol. 2023 Nov;17(11):2356-2379. doi: 10.1002/1878-0261.13374. Epub 2023 May 12. PubMed |
| Redox proteomics combined with proximity labeling enables monitoring of localized cysteine oxidation in cells. Kisty EA, Falco JA, Weerapana E. Cell Chem Biol. 2023 Mar 16;30(3):321-336.e6. doi: 10.1016/j.chembiol.2023.02.006. Epub 2023 Mar 7. PubMed |
| Cellular Proteomic Profiling Using Proximity Labeling by TurboID-NES in Microglial and Neuronal Cell Lines. Sunna S, Bowen C, Zeng H, Rayaprolu S, Kumar P, Bagchi P, Dammer EB, Guo Q, Duong DM, Bitarafan S, Natu A, Wood L, Seyfried NT, Rangaraju S. Mol Cell Proteomics. 2023 Jun;22(6):100546. doi: 10.1016/j.mcpro.2023.100546. Epub 2023 Apr 14. PubMed |
| Actin-binding protein filamin B regulates the cell-surface retention of endothelial sphingosine 1-phosphate receptor 1. Zhao X, Kiyozuka K, Konishi A, Kawabata-Iwakawa R, Minamishima YA, Obinata H. J Biol Chem. 2023 Jul;299(7):104851. doi: 10.1016/j.jbc.2023.104851. Epub 2023 May 21. PubMed |
| An independent regulator of global release pathways in astrocytes generates a subtype of extracellular vesicles required for postsynaptic function. Levy-Myers R, Daudelin D, Na CH, Sockanathan S. Sci Adv. 2023 Jun 23;9(25):eadg2067. doi: 10.1126/sciadv.adg2067. Epub 2023 Jun 23. PubMed |
Crosstalk between RNA m(6)A and DNA methylation regulates transposable element chromatin activation and cell fate in human pluripotent stem cells.
Sun T, Xu Y, Xiang Y, Ou J, Soderblom EJ, Diao Y.
Nat Genet. 2023 Aug;55(8):1324-1335. doi: 10.1038/s41588-023-01452-5. Epub 2023 Jul 20.
PubMed
Associated Plasmids |
| Intralumenal docking of connexin 36 channels in the ER isolates mistrafficked protein. Tetenborg S, Liss V, Breitsprecher L, Timonina K, Kotova A, Acevedo Harnecker AJ, Yuan C, Shihabeddin E, Ariakia F, Qin G, Chengzhi C, Dedek K, Zoidl G, Hensel M, O'Brien J. J Biol Chem. 2023 Nov;299(11):105282. doi: 10.1016/j.jbc.2023.105282. Epub 2023 Sep 22. PubMed |
| Optineurin-facilitated axonal mitochondria delivery promotes neuroprotection and axon regeneration. Liu D, Webber HC, Bian F, Xu Y, Prakash M, Feng X, Yang M, Yang H, You IJ, Li L, Liu L, Liu P, Huang H, Chang CY, Liu L, Shah SH, Torre A, Welsbie DS, Sun Y, Duan X, Goldberg JL, Braun M, Lansky Z, Hu Y. bioRxiv [Preprint]. 2024 Apr 3:2024.04.02.587832. doi: 10.1101/2024.04.02.587832. PubMed |
| Dynamic control of gene expression by ISGF3 and IRF1 during IFNbeta and IFNgamma signaling. Ravi Sundar Jose Geetha A, Fischer K, Babadei O, Smesnik G, Vogt A, Platanitis E, Muller M, Farlik M, Decker T. EMBO J. 2024 Jun;43(11):2233-2263. doi: 10.1038/s44318-024-00092-7. Epub 2024 Apr 24. PubMed |
| TurboID-Based IRE1 Interactome Reveals Participants of the Endoplasmic Reticulum-Associated Protein Degradation Machinery in the Human Mast Cell Leukemia Cell Line HMC-1.2. Ahmed N, Preisinger C, Wilhelm T, Huber M. Cells. 2024 Apr 25;13(9):747. doi: 10.3390/cells13090747. PubMed |
| Proximal protein landscapes of the type I interferon signaling cascade reveal negative regulation by PJA2. Schiefer S, Hale BG. Nat Commun. 2024 May 27;15(1):4484. doi: 10.1038/s41467-024-48800-5. PubMed |
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