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  1. Plan Your Experiment

    Type
    Guide
    ...mixed cell population. The region of interest is PCR amplified, PCR products are denatured-renatured, treated...that introduce a novel restriction site. The region of interest is PCR amplified, digested with the appropriate...region of interest can be PCR amplified using primers that (A) flank the region of interest (deletions... The PCR product is then run on an agarose gel to determine whether the edit was successful. PCR amplification...appropriate restriction enzyme and run on an agarose gel to identify DNA fragments. PCR amplification and gel...an agarose gel to identify DNA fragments. PCR and restriction digest (for HDR repaired DSBs): For small...exact sequence of targeted alleles. Involves PCR amplification of targeted region from DNA, subcloning into...
  2. Cloning

    Type
    Guide
    ...is also easy to add restriction sites to any piece of DNA during PCR amplification, allowing for it to...dissimilar from restriction enzyme cloning). To do this your DNA fragment must first be amplified with specific... rapid cloning of PCR products into donor plasmids without the need for restriction enzyme cloning. For...the PCR primers for the insert, based on the destination vector sequence and choice of restriction site...molecular cloning scientists can amplify and manipulate genes of interest and then insert them into plasmids...a single adenosine (A) overhang on the 3' end of PCR products. The complementary thymine (T) comes from... incredibly quick and easy way to clone a fresh PCR product into a plasmid. The major disadvantage of ...
  3. Guide to Using Pooled Libraries

    Type
    Guide
    ...surviving cells are collected, their plasmids are PCR-amplified and sequenced using NGS to identify their cDNA...see if it should be amplified before you conduct your screen. If you need to amplify the library, please...Overview of what pooled libraries are; how to amplify and use a pooled library; and what types of screens... 175,000 different gRNA-containing plasmids). Amplifying and Using the Library Once you receive your library...general steps to take in the screening process. Amplify the library (electroporation and maxiprep). If ... Pooled Library Amplification Protocol for Addgene's generalized library amplification protocol. Read ...: Pooled Library Guide Introduction Library Amplification Types of Screens Resources An Introduction to...
  4. Lentiviral Guide

    Type
    Guide
    ...simply add restriction sites onto the insert of interest using PCR. This is accomplished by PCR amplifying...or appending compatible restriction sites onto the insert of interest using PCR. The process of subcloning...of R, is capped, and proceeds through U5 and the rest of the provirus. Third generation vectors use a ...containing only one restriction site? If a lentiviral transfer plasmid contains a single restriction site, one ... basically shuffling restriction sites between vectors until the gene of interest is flanked by sites ...using primers that contain the restriction sites needed. Functional restriction sites must be a certain number...Lentiviral transfer plasmid encoding your insert of interest. The transgene sequence is flanked by long terminal...
  5. Molecular Biology Reference

    Type
    Guide
    ... sequence used as an initiation point for PCR amplification or DNA sequencing of the plasmid. Primers ... for the ability of the plasmid to be copied (amplified) by bacteria, which is an important characteristic...pieces, labeled with a short DNA barcode, and amplified. These DNA fragments are attached to a glass slide... other. These attached DNA templates are then amplified again producing ~1,000 copies of each template... using bacteria, which can uptake plasmids and amplify them during cell division. Because bacteria are...contains several restriction enzyme sites, enabling easy insertion of DNA by restriction enzymes digestion...used for cloning by restriction enzyme digestion. For more information about restriction enzymes check out...
  6. CRISPR Guide

    Type
    Guide
    ...enzymes to bind target DNA PCR P olymerase C hain R eaction; Used to amplify a specific sequence of DNA...experiments and must be amplified before use (Figure 8C), following the amplification protocol specified by...conditions: The sequence is unique compared to the rest of the genome The target is present immediately ...verify that the composition of your amplified library matches that of the original library. Next, you’... copies of the aptamer improves stability and amplifies the signal for better imaging of genomic loci,...Publications CRISPR Overview Bacteria have an interesting adaptive immune response that detects and eliminates... Cas enzyme and a gRNA specific to the gene of interest. The genomic target of the gRNA can be any ~20...
Showing: 1 - 6 of 6 results