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  1. Nanoblades: Tiny CRISPR Ninjas for Genome Editing Difficult Cells

    Type
    Blog Post
    Published
    Sept. 26, 2019, 12:50 p.m.
    ....org Check out our comprehensive CRISPR guide Find CRISPR plasmids and resources Learn about viral production...ability to infiltrate cells. Options for CRISPR delivery include plasmid transfection, RNP electroporation, ...Nanoblades to Existing CRISPR Delivery Methods When compared head-to-head with existing CRISPR delivery technologies...delivery Learn about CRISPR delivery methods for mammalian cells Browse our CRISPR 101 blog post Resources...CRISPR is a simple and versatile tool for genome engineering, but its utility is dependent on its ability...pluripotent stem cells (hiPSCs). Nanoblades, a new CRISPR delivery method developed by the Ricci Lab and ...and the T. Ohlmann Lab, adds a covert tool to the CRISPR tool box.  Nanoblades are engineered murine leukemia...
  2. Back to Bacteria: CRISPR gRNA Multiplexing Using tRNAs

    Type
    Blog Post
    Published
    June 2, 2015, 6:06 p.m.
    ...Interested in using PTG plasmids in your research? Check out the PTG plasmids or plant expression systems.... PubMed.  Find the plasmids from this publication at Addgene Dimeric CRISPR RNA-guided FokI nucleases...In the short time since its development, CRISPR/Cas9 genome editing has been used to study the effect...recombination. To further increase the utility of CRISPR/Cas9, it will be necessary to improve its multiplexing...Yinong Yang’s group did just that as part of their CRISPR work in rice plants. Yang was intrigued by the ...common to prokaryotes and eukaryotes. Though the plasmids made by Xie et. al are specifically designed for... a standard pol III-gRNA, which will facilitate CRISPR/Cas9 multiplexing in systems with limited packaging...
  3. Our Most Popular Blog Posts from 2019

    Type
    Blog Post
    Published
    Dec. 31, 2019, 2:26 p.m.
    ...biology over the past year: CRISPR, optogenetics, chemogenetics, plasmids, fluorescent proteins, careers...blog posts from the year. 10. Hot Plasmids - March 2019 - Anti-CRISPR, 2in1 Cloning, Fluorescent Voltage...feature some recently deposited plasmids every quarter. The “hot plasmids” from last March were quite popular...behalf of scientists. 9. Plasmids 101: Positive and Negative Selection for Plasmid Cloning by Jennifer Tsang...and Flexibility to CRISPR Editing by Jennifer Tsang Prime editing is a new CRISPR technique from David...Addgene news Find the most recent plasmid blog posts Find the most recent CRISPR blog posts Resources at Addgene... about mNeonGreen, mTFP1, and mWasabi and find plasmids containing these fluorescent proteins at Addgene...
  4. 15 Years of Addgene: The Top 15 Plasmids

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    Blog Post
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    Jan. 8, 2019, 1:54 p.m.
    ...other CRISPR plasmids are from the Zhang lab. In fact, the Zhang lab has shared over 40,000 CRISPR-Cas9...requested plasmids over the last 15 years - the majority of these being lentiviral or CRISPR tools. How...and an envelope expressing plasmid, such as our second most requested plasmid of all time, pMD2.G. Find...wide range of applications. This plasmid was the top requested plasmid of 2017. Find pMD2.G. pSpCas9(BB... top requested plasmid from 2016. You may notice the “V2.0” at the end of this plasmid which indicates...prior version of this plasmid. Indeed the first version is the 15th most popular plasmid of all time, but ...envelope expressing plasmid pMD2.G. Find pMDLg/pRPE. scramble shRNA - This plasmid from David Sabatini...
  5. Comparing Cas9 to NgAgo: Can the Argonautes Best CRISPR?

    Type
    Blog Post
    Published
    June 9, 2016, 2:30 p.m.
    ...Lab Browse the CRISPR Collection Find CRISPR Pooled Libraries  ...for short. Addgene has already distributed this plasmid all over the world, and the question on everyone...everyone’s minds is: could NgAgo replace CRISPR? Such a drastic shift won’t happen overnight, but there are...are a few reasons why you might choose NgAgo over CRISPR proteins Cas9 or Cpf1 - keep reading to learn more...identified NgAgo and showed that it can cleave plasmid and genomic DNA in a variety of mammalian cell ...homology-directed repair when a template is supplied. Find Plasmids from the NgAgo Publication at Addgene Cas9 and...targeting flexibility Unlike Cas9 and the other CRISPR enzymes, NgAgo does not require a PAM sequence,...
  6. Enhancing CRISPR Targeting Specificity with eSpCas9, SpCas9-HF1, & HypaCas9

    Type
    Blog Post
    Published
    Dec. 16, 2015, 3:30 p.m.
    ... Our CRISPR 101 Series Resources on the Addgene Website Find CRISPR Plasmids Browse our CRISPR Guide...evidenced by all the CRISPR publications, press, and plasmids out there, it’s obvious that CRISPR is a ground-...governs CRISPR-Cas9 targeting accuracy." Nature (2017). PubMed PMID: 28931002. Find plasmids from this...affecting our everyday lives very soon. Not only is CRISPR having effects on various biological disciplines... The off-target problem It is well known that CRISPR/Cas9 genome editing can result in unwanted changes...Berkeley set out to decrease the off target effects of CRISPR/Cas9 by altering the nuclease activity of the Cas9...Cas9 variant (HypaCas9) to the pool of enhanced CRISPR tools. In their work, Chen et al. 2017 used single...
  7. History of CRISPR Cas - A tale of survival and evolution

    Type
    Blog Post
    Published
    Nov. 25, 2013, 10:12 p.m.
    ...check out Addgene’s CRISPR Guide or find CRISPR/Cas plasmids for your research. Do you have a cool idea or...blockbuster known as the CRISPR (clustered regularly interspaced palindromic repeats) Cas (CRISPR associated genes...them into the CRISPR sequence. Separate Cas proteins then express and process the CRISPR loci to generate...the challenge - Evolution of anti-CRISPR genes in phages The CRISPR/Cas adaptive immune system seems like...identified that neutralize CRISPR/Cas. Earlier this year, expression of 1 of 5 anti-CRISPR genes were found to...translatable to the other CRISPR subtypes. Still, the large and dynamic range of CRISPR systems between and ...to multiple plasmids used for various platform applications. For more information on CRISPR/Cas, check ...
  8. Hot Plasmids - January 2023

    Type
    Blog Post
    Published
    Jan. 31, 2023, 2:15 p.m.
    ...of the new plasmids, antibodies, and viral preps in the repository through our hot plasmids articles. ...Figure 3 Colognori et al 2022.   Find CRISPR Csm plasmids here! Colognori D, Trinidad M, Doudna JA.... missed something smokin'? You can pitch a Hot Plasmids section (antibodies and viral preps welcome!) ...here. Here's what you'll find in this post: CRISPR-Csm: A novel RNA targeting system Heat-inducible...N86/8R] ready-to-use antibody Hyperfolder YFP CRISPR-Csm: A novel RNA targeting system by: Susanna Stroik... a leg up on the alternatives - RNAi and Cas13. CRISPR-Csm doesn’t degrade proximal RNAs nor does it have... off-target effects, both of happen with Cas13. CRISPR-Csm degrades both nuclear and cytoplasmic mRNA ...
  9. CRISPR-Cas14: a family of small DNA-targeting enzymes enabling high-fidelity SNP genotyping

    Type
    Blog Post
    Published
    Nov. 29, 2018, 1:53 p.m.
    ... to a CRISPR array and the universal CRISPR integrase, cas1. They discovered a family of CRISPR-Cas systems...Addgene.org Find the Cas14 plasmids here Checkout our CRISPR guide page Browse the CRISPR collection ...adjacent CRISPR array and intergenic regions containing the putative tracrRNA into a plasmid and expressed...about DETECTR Browse all of the CRISPR blog posts Download our CRISPR cheat sheet Resources on Addgene.org...genome of virtually any organisms on this planet, CRISPR-Cas systems were merely adaptive immune systems...other Cas proteins found in the so-called class 2 CRISPR-Cas systems. There are 24 variants of the cas14...predicted RuvC nuclease domain, characteristic of CRISPR-Cas enzymes. In contrast to other Cas enzymes, ...
  10. CasPEDIA: A Functional Classification of Cas Enzymes

    Type
    Blog Post
    Published
    Jan. 25, 2024, 2:15 p.m.
    ...on Addgene.org CRISPR software and resources Addgene CRISPR Guide Addgene’s CRISPR 101 eBook More ...the Addgene blog CRISPR 101: Which Cas9 do I choose for my CRISPR experiment? CRISPR 101: Cas9 The Other...with any other required non-CRISPR-associated host factors required for CRISPR processing. For each enzyme...exact Cas9 plasmid used by Jinek et al. 2012, or browsing for the latest AsCas12a plasmids, Addgene and...Expanding CRISPR Beyond SpCas9 More resources from the Innovative Genomics Institute      CRISPRpedia IGI... gene targeting. Fast forward a decade, and the CRISPR field has exploded with dozens of Cas enzymes and...find a link to search Addgene's collection for plasmids containing that enzyme, and embedded in the References...
  11. CRISPR Protocol for Genomic Deletions in Mammalian Cell Lines [Video]

    Type
    Blog Post
    Published
    Feb. 18, 2015, 3:09 p.m.
    .... More CRISPR Refereces: Browse CRISPR Plasmids CRISPR Information at Addgene More CRISPR-Cas Blog...reprint of the CRISPR article "Generation of Genomic Deletions in Mammalian Cell Lines via CRISPR/Cas9" from...procedures. The video details how to transfect CRISPR plasmids into MEL cells by electroporation, sort your...Orkin and Daniel Bauer's labs details the use of CRISPR/Cas9 to create genomic deletions in mammalian cell...discuss the motivations behind this research.   Using CRISPR/Cas9 for targeted genomic deletions We were inspired...collaboration with the Porteus lab [2]. With the advent of CRISPR/Cas9, we began to explore the paired double-strand...bear an indel or inversion mutation [3]. In the CRISPR era, the genomic landscape may be surveyed in unprecedented...
  12. Genome Engineering, CRISPR, and Research in Singapore: Interview with Wei Leong Chew

    Type
    Blog Post
    Published
    Feb. 6, 2018, 2 p.m.
    ...Addgene.org Find CRISPR Plasmids Find Synthetic Biology Plasmids Browse our CRISPR Guide Pages ...Addgene Blog Visit our CRISPR featured topic page Check out our Hot Plasmids Podcast Listen to our interview...genome engineering. Chapter 1: Early research on CRISPR and what it's like to work in a competitive field... crispr...
  13. Hot Plasmids: Fall 2024

    Type
    Blog Post
    Published
    Nov. 21, 2024, 1:30 p.m.
    ...of the new plasmids, antibodies, and viral preps in the repository through our Hot Plasmids articles.  ...disruption in Mycobacterium abscessus using a dual-plasmid CRISPR/Cas9 system By Aryana Khosravani Deborah Hung...Hung’s lab has developed a novel dual-plasmid CRISPR/Cas9 system for gene disruption in Mycobacterium ...first use of CRISPR/Cas9 in M. abscessus. The simplicity and efficiency of this dual-plasmid approach makes...     Figure 4. Overview of the dual-plasmid CRISPR/Cas9 workflow in M. abscessus. A) Sth1Cas9 ...cassette on a plasmid expressing mCherry and resistance selection marker HygR. The CRISPR system is induced...al., 2024 under CC-BY license.   Find plasmids for CRISPR/Cas9 in M. abscessus here! Neo D, Clatworthy...
  14. Introducing Addgene's New Search - Find Plasmids More Easily For Your Research!

    Type
    Blog Post
    Published
    Dec. 3, 2019, 11:38 a.m.
    ...for “CRISPRplasmids keeps more than half of these. Instead we can navigate first to the CRISPR Resources... best plasmid for your research can be a daunting challenge. With over 80,000 deposited plasmids from ...educational resources: plasmid, pooled library, blog posts, protocols, and more. Selecting crispr in Guides will...through to the plasmid search results: More than 200 different GCaMP containing plasmids are available...search tool lets you access plasmids from journal articles. From paper to plasmid Authors regularly indicate... to include specific plasmid ID numbers. If you know the ID number for a plasmid, your straightforward...page to see the plasmids deposited by our own CSO. But what if you don’t have plasmid ID numbers, or you...
  15. Degrading DNA with Cascade-Cas3

    Type
    Blog Post
    Published
    Feb. 11, 2025, 2:15 p.m.
    ... blog CRISPR 101: Cas9 vs. The Other Cas(s) CRISPR 101: Anti-CRISPR Proteins Switch Off CRISPR-Cas Systems...Using CRISPR-Transposons Additional resources on Addgene.org CRISPR guide Cascade-Cas3 Plasmid collection...Cascade-Cas3 plasmids in Addgene's collection! A “complex” system Cas3 is part of the Class 1 CRISPR family,..., these types of CRISPR systems work using a multi-Cas complex called Cascade (CRISPR-associated complex...mechanical work for editing. Class 1 CRISPR systems make up the majority of CRISPR-based immune systems in bacteria...The versatility of CRISPR allows you to play with DNA in a number of ways, from small edits that change...derivative of Cas9, but the ever-expanding repertoire of CRISPR has brought many other Cas effectors to light. ...
  16. Targeting HIV-1 with CRISPR: Shock and Kill or Cut it Out?

    Type
    Blog Post
    Published
    May 10, 2016, 2:30 p.m.
    ...updated CRISPR Guide! Find CRISPR Plasmids for Your Research Browse gRNA Design Tools  ...became much more realistic with the advent of CRISPR. Using CRISPR/Cas9 SAM to "shock and kill" To “shock ...HIV-1 out of the genome with CRISPR/Cas9 Before the introduction of CRISPR, HIV-1 genome editing with ...Central PMCID: PMC4778041. Find CRISPR and lentiviral packaging plasmids used in this publication at Addgene...Treating Muscular Dystrophy with CRISPR Gene Editing Learn to Use CRISPR Pooled Libraries for Genome-Wide... to vanquish these hidden viral reservoirs, and CRISPR may be the way to accomplish this tough job! Kamel...University has demonstrated two potential strategies for CRISPR-HIV therapeutics - one using dCas9-SAM to activate...
  17. Kiran Musunuru on the Newest TALEN Genome-Editing System

    Type
    Blog Post
    Published
    Dec. 10, 2013, 3:13 p.m.
    ...has two plasmids. In many cases, CRISPR may be more efficient. You might often start with CRISPR/Cas9, ... TALEN kit to CRISPR/Cas9? When would you choose one or the other? Musunuru: The CRISPR/Cas9 system is...kit includes 834 plasmids for the pieces you need to assemble. Our system for CRISPR/Cas9 (also available...effector nuclease (TALEN) kit consisting of 834 plasmids. The researchers showed they could use their TALEN... now makes possible, and how it compares to his CRISPR/Cas9 system. Addgene: For people unfamiliar with...particular DNA sequence? Musunuru: The kit includes 832 plasmids containing prefabricated pieces that allow you...the genome in rapid fashion. The two remaining plasmids in the kit have the rest of the protein in place...
  18. CRISPR 101: Targeting Non-Coding RNAs with CRISPR/Cas9

    Type
    Blog Post
    Published
    Nov. 14, 2024, 2:15 p.m.
    ...Resources on addgene.org Addgene's CRISPR Guide Addgene's CRISPR 101 eBook CRISPR resources More resources on... DNA, CRISPR interference (CRISPRi) and CRISPR activation (CRISPRa) are powerful tools. CRISPRi uses a... for us, CRISPR is an incredibly versatile system that can be tweaked to target ncRNA. CRISPR/Cas9 techniques...unexpectedly affect nearby genes (Figure 1A-C). Find CRISPR plasmids at Addgene! Knock-in: Introducing tags or stop...Bester 2021.    Alternative CRISPR systems for targeting ncRNAs While CRISPR/Cas9 has proven to be an extremely...If the CRISPR/Cas9 system is not effective for your experiments, there are plenty of other CRISPR-based...many protein-coding genes thanks to systems like CRISPR/Cas9 that allow them to manipulate full genes and...
  19. Plasmids 101: The protein expression toolbox

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    Blog Post
    Published
    Feb. 16, 2023, 7:05 p.m.
    ...Addgene blog Plasmid 101: Inducible Promoters Plasmid 101: Repressible Promoters CRISPR 101: Which Cas9...for 1-3 days. There’s also a CRISPR for that! CRISPR interference (CRISPRi) targets a catalytically dead...little while Yes, there’s a CRISPR for that, too! CRISPR activators (CRISPRa) are transcriptional activators... a gene (cDNA) can be done by either plasmid or virus. A plasmid carrying your cDNA can be targeted for...approach - read more about them on our CRISPRa blog! Fig. 1 CRISPR activator and repressor mechanisms...knock out the gene for your protein of interest. CRISPR-Cas9 and a custom gRNA is all you need to generate...knock out. Looking for some permanent knock out plasmids? Check out our Cre vector and Murine LoxP vector...
  20. New Tools Enable CRISPRa for Neuroscience Applications

    Type
    Blog Post
    Published
    July 2, 2019, 12:51 p.m.
    ...our comprehensive CRISPR guide Find CRISPR plasmids and resources Find CRISPRa plasmids ...blog Browse our CRISPR blog posts Download our CRISPR cheat sheet Download our CRISPR eBook Resources... for sensitive applications such as CRISPR screening. The plasmids used by the Qi Lab for this particular...recent papers describe the development of CRISPR activation (CRISPRa) tools for neuroscience, including transgenic...neuroscience research. What is CRISPR-based activation? To summarize, CRISPRa uses a nuclease-dead variant... using CRISPRa to target individual genes can be relatively laborious because multiple plasmids/viruses...construct for generating the SPH mouse. (B) AAV plasmids used to express CRE under neuron-specific promoters...
  21. 22 Hot Plasmid Technologies from 2014

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    Blog Post
    Published
    Jan. 6, 2015, 5:21 p.m.
    ...information on these new CRISPR screening tools, see our CRISPR/Cas Plasmids: Pooled Libraries webpage...CRISPR-Cas resources at www.addgene.org/CRISPR/ to browse CRISPR plasmids, watch informational videos, download...Tet-inducible CRISPR activators and repressor plasmids. (Kearns et al., Development. 2014..) CRISPRs for Xenopus.... 2014..) Our CRISPR-Cas collection of plasmids updates frequently, so visit our CRISPR pages often to... Hot Plasmid list. Other popular plasmids & blog posts @Addgene: The 10 Most Distributed Plasmid Technologies...vectors and sgRNA libraries expand upon the CRISPR family of plasmids by offering a lentivirus-based mechanism...Lentiviral CRISPR Libraries Enable Genome-Scale, Knockout Screening. Also, check out our updated CRISPR-Cas ...
  22. dTAG - You're it!

    Type
    Blog Post
    Published
    June 21, 2018, 2:06 p.m.
    ...on Addgene.org Browse all CRISPR plasmids CRISPR plasmids for protein tagging Find validated gRNAs ...1). Plasmids: We generated a series of plasmids that are available from Addgene. These plasmids enable...Addgene Blog Easi-CRISPR: Generating Knock-In and Conditional Mouse Models CRISPR 101: Cas9 Nickase Design...Detailed protocols describing the use of these plasmids are available here. The Methods section of Nabet...cloning procedures used to construct the deposited plasmids. Molecules: We synthesized dTAG molecules by conjugating...terminus should be tagged, the dTAG lentiviral plasmids can serve as a rapid means of comparing functionality... selective degradation of FKBP12F36V-BRD4 using CRISPR/Cas9-mediated knock-in, and to evaluate in vivo...
  23. Hot Plasmids and Viral Preps - May 2021

    Type
    Blog Post
    Published
    May 18, 2021, 1:15 p.m.
    ...find all of the CRISPR plasmids available from Addgene, head over to our CRISPR Plasmids and Resources page...   The CRISPR corner By Jennifer Tsang Here are a few highlights from recent CRISPR plasmids. To find...subset of the new plasmids and viral preps in the repository through our hot plasmids articles. These articles...recent plasmid deposits and we hope they'll make it easier for you to find and use the plasmids you need...Nanocompartments for yeast bioproduction pathways The CRISPR corner New ready-to-use viral preps Mapping antibody...Hutchinson Cancer Research Center developed a pooled plasmid library encompassing all possible amino acid mutations...anti-SARS-CoV-2 antibodies. In the library, each plasmid encodes the mutated spike protein and a barcode...
  24. Google Forums Round Up: First Impressions of NgAgo

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    Blog Post
    Published
    Aug. 4, 2016, 2:30 p.m.
    ... Request NgAgo Find CRISPR Resources Catch Up on Your CRISPR Background ...sequencing on select regions of all distributed plasmids as part of quality control, but does not perform...genome engineer sharing the stage with much-lauded CRISPR-Cas9 is DNA-guided endonuclease NgAgo! We'll discuss...development before it can truly be pitted against CRISPR head-to-head.  Exciting features of NgAgo First...which seem resistant to Cas9 cleavage (1). Both the CRISPR-Cas9 and NgAgo genome engineering methods have ...unlike an RNA guide, it cannot be produced from a plasmid in cells. Additionally, in vitro assembly of NgAgo...with 5’-P-ssDNA guides and an NgAgo expression plasmid to edit a gene in vivo. Try NgAgo for Yourself ...
  25. Cpf1 Update: Comparison to Cas9 and NgAgo

    Type
    Blog Post
    Published
    July 14, 2016, 2:30 p.m.
    ... of Cpf1 Type II CRISPR systems based on Cas9 were thought to be the simplest CRISPR systems and the easiest... is well suited for genome editing.  Find Cpf1 Plasmids at Addgene   Image attribution: Zetsche...is a single RNA-guided endonuclease of a class 2 CRISPR-Cas system." Cell (2015). PubMed PMID: 26422227...Cpf1-driven systems added another option to the CRISPR toolbox. When Cpf1 was first discovered, researchers...nt vs 100 nt.) However, the newly described non-CRISPR protein NgAgo is smaller than any of these options..., so it has the potential to eclipse any of the CRISPR nucleases in AAV-based applications. Get More Cpf1...HDR over NHEJ, so comparing HDR efficiency across CRISPR nucleases and NgAgo is an important next step for...
  26. Mapping the 4D nucleome with CRISPR/Cas9

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    Blog Post
    Published
    Aug. 11, 2015, 2:30 p.m.
    ...It seems that there’s a new CRISPR advance or technique published every week! One of the newest applications...hybridization (FISH) or fluorescently labeled TALEs, CRISPR/Cas9’s ease of use and ability to label live cells...understanding of chromatin organization. This fluorescent CRISPR/Cas9-based method is a great step forward in live...chromothripsis). As this study joins the pantheon of useful CRISPR/Cas9 techniques, we at Addgene are excited to see... see what’s coming next! References Multicolor CRISPR labeling of chromosomal loci in human cells. Ma ....1420024112. Epub 2015 Feb 23. Pubmed. Find the plasmids from this publication at Addgene. Dynamic imaging...genomic loci in living human cells by an optimized CRISPR/Cas system. Chen B, Gilbert LA, Cimini BA, Schnitzbauer...
  27. The 10 Most Distributed Plasmid Technologies in Addgene's First 10 Years

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    Blog Post
    Published
    Jan. 8, 2014, 3:10 p.m.
    ...cloning vector. Lentiviral Plasmids -  If you're familiar with the pLKO plasmids you'll note that those are...Actually, these two plasmids from Didier Trono's lab are our two most popular plasmids of the past 10 years...influx of plasmids for reprogramming differentiated cells into pluripotent stem cells. Plasmids from Shinya... have 19 different ubiquitin plasmids in the repository. 100,000 Plasmids Shipped! - By 2010, Addgene ...our stride. We shipped our 100,000th plasmid. A variety of plasmids continued to be popular years after...our collection. CRISPR/Cas9 - At Addgene, 2013 will be known as the "Year of the CRISPR." The newest genome...purposes that we had to create a CRISPR page to keep up with all the new plasmids. So far, we have distributed...
  28. Viral Vectors 101: Preparing Pooled Libraries

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    Blog Post
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    July 13, 2023, 1:15 p.m.
    ...single plasmid transformation, though, a pooled library has hundreds to millions of distinct plasmids, all...anyone who has worked with individual plasmids knows, some plasmids amplify well and others don’t. The size...screening, and validation of CRISPR libraries. The Genome Engineering using CRISPR/Cas Systems Forum- Moderated...Lentiviral CRISPR Libraries- A nice overview of what to consider when using pooled lentiviral CRISPR libraries...pooled library, which contains a collection of plasmids in a single tube, or a pre-made viral prep library...but we do distribute several of our most popular CRISPR pooled libraries and one of our most popular barcoding... prepare the libraries for you.  Starting from plasmids requires amplification, verification, and lentiviral...
  29. Rewiring Metabolic Circuitry with CRISPR RNA Scaffolds [Video]

    Type
    Blog Post
    Published
    April 7, 2015, 4:21 p.m.
    ... Plasmids for CRISPRi are described here: http://www.addgene.org/crispr/qi/ Plasmids described in  ...Programs with CRISPR RNA Scaffolds. Cell, 160(1), 339-350 (2015). PubMed. Find the Plasmids @Addgene: ...Modifying the CRISPRi system for multidirectional control The CRISPR interference (CRISPRi) model consists...Complex Synthetic Transcriptional Programs with CRISPR RNA Scaffolds." Adam has also created a video to...metabolic biofactories by demonstrating the use of CRISPR-based RNA scaffolds to mimic natural transcriptional...constructs to be introduced simultaneously in a single plasmid. The functionality of the RNA scaffolds follows...AdamChinFatt     References Qi, L. S. et al. Repurposing CRISPR as an RNA-guided platform for sequence-specific...
  30. Overcoming the AAV Size Limitation for CRISPR Delivery

    Type
    Blog Post
    Published
    Sept. 16, 2020, 1 p.m.
    ...Addgene.org Check out our CRISPR Guide Find CRISPR Plasmids ...toxicity. More AAV-based CRISPR systems Smaller Cas proteins SaCas9 isn't the only CRISPR enzyme that’s small...Moineau S (2010) The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature 468:...about Cas9 Variants and the Expanded CRISPR Toolbox Read about CRISPR enzyme Cpf1 Read our Introduction ... and last updated Sep 16, 2020 by Beth Kenkel.  CRISPR genome editing has quickly become a popular system...characterization for in vivo studies. One of the pitfalls of CRISPR/Cas9 genome editing is the potential for off-target...liver-specific serotype AAV8. Since the efficiency of CRISPR/Cas9 genome editing varies across targets, they...
  31. Plasmids 101: Modular Cloning Applications and Kits

    Type
    Blog Post
    Published
    May 14, 2024, 1:15 p.m.
    ...more of these kits, as there are many options! CRISPR CRISPR-Cas can harness the power of MoClo to expand...repurposed for CRISPR applications (gene insert = Cas9 + gRNA), Addgene distributes specialized CRISPR kits too... made comparisons between CRISPR components expressed from different plasmid backbones. They noted that...comparisons of CRISPR parts. The Fragmid system was used to assess how different lentiviral plasmid backbone...including conditional gene expression, multiplexed CRISPR, and chromosomal integration of larger expression...targetability and effectiveness. Perhaps the most intuitive CRISPR MoClo application is to assemble multiple unique...edit optimization, and more. While there are many CRISPR-Cas libraries and tools available for certain model...
  32. CRISPRainbow and Genome Visualization

    Type
    Blog Post
    Published
    Feb. 28, 2017, 3:30 p.m.
    ...is not scalable for every locus...unlike CRISPR. Early CRISPR labeling techniques allowed researchers ...PMC3918502. Find plasmids from this publication at Addgene. 2. Ma, Hanhui, et al. “Multicolor CRISPR labeling...fluorescent CRISPR labeling, they took a new approach: labeling the gRNA itself. In their CRISPRainbow paper...Colorful CRISPR technologies are helping researchers visualize the genome and its organization within...visualize genomic loci in vivo The flexibility of CRISPR has improved our ability to target almost every... work of Chen et al., Thoru Pederson’s lab used CRISPR to label multiple loci in distinct colors. To create...Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System.” Cell 155 (2013): 1379-1491. Pubmed...
  33. X-CHIME: Context Dependent Germline Knockout in Immune Cells

    Type
    Blog Post
    Published
    Jan. 16, 2024, 6:13 p.m.
    ...Editing CRISPR Cheat Sheat Resources from Addgene.org CRISPR Guide CRISPR: Protocol for Genome Deletions in... Addgene blog CRISPR101: Validating Your Genome Edit How to Design Your gRNA for CRISPR Genome Editing...time-consuming, as it only changes one gene at a time. CRISPR-based systems enable gene knockout in immune cells...and in combination with different genes. Having CRISPR systems for assessing genes in defined contexts...Table 1). The four systems Name Function Plasmid Transduction Marker Mouse Strain C-CHIME...  The X-CHIME deposit also includes pXPR_071, a plasmid that leads to higher titer lentivirus preparations...first generation CHIME (pXPR_053). Find X-CHIME plasmids here!   Marty LaFleur is a Postdoctoral Fellow...
  34. Addgene-Seeding Labs Plasmid Grant: Accelerating Science Globally - 5 Scientists, 4 Countries & 3 Continents!

    Type
    Blog Post
    Published
    July 18, 2017, 12:41 p.m.
    ...our CRISPR resources and CRISPR for plants Bacterial Expression Systems Learn about Global Plasmid Distribution...Addgene-Seeding Labs plasmid grant is a collaborative endeavor providing plasmids to researchers in developing...the anti-phage CRISPR effect observed in bacteria. Learn more about the different CRISPR applications in...Addgene-Seeding Labs Plasmid Grant Check Out Previous Addgene-Seeding Labs Plasmid Grant Awardees Listen...scientists who were awarded the Addgene-Seeding Labs Plasmid grant this year. These scientists work on projects...tolerant plant, Dr. Robertson aims to make use of the CRISPR/Cas9 technology to engineer plants that are able...as the pET GFP LIC cloning vector and the pOKD plasmids. The recombinant Cry proteins will then be screened...
  35. Human Germline Editing Using CRISPR

    Type
    Blog Post
    Published
    Aug. 10, 2017, 2:19 p.m.
    ...Once with CRISPR Resources on Addgene.org Browse All CRISPR Plasmids Check Out Our CRISPR Guide Pages...Addgene Blog Check out Our New CRISPR Topic Page Read about High Fidelity CRISPR Variants Target Multiple Genes... updated in response to this paper. Any hint of CRISPR editing in human embryos has been met with a storm...talk about, as it represents another step towards CRISPR germline editing of disease-causing mutations. ...skin, blood and semen samples. Ma et al. designed plasmids containing Cas9 and two different gRNAs, and electroporated...mosaicism. To circumvent this problem, they co-injected CRISPR machinery with sperm into M phase oocytes, thus...whole genome sequencing in selected control and CRISPR-Cas9 injected embryos. In all cases, they did not...
  36. Progress Towards a PAM-Free CRISPR

    Type
    Blog Post
    Published
    March 7, 2024, 2:39 p.m.
    ...  Resources on Addgene.org Addgene’s CRISPR Guide CRISPR Plasmids and Resources Resources on the Addgene...engineered CRISPR-Cas9 variants. Science 368,290-296(2020). DOI:10.1126/science.aba8853 (Plasmids available...Cas9 xCas9: Engineering a CRISPR Variant with PAM Flexibility History of CRISPR Cas – A Tale of Survival...sequence for your genome engineering experiment. With CRISPR entering the clinic for correction of disease-causing...landscape. The need for PAM-less editing   Guides for CRISPR are typically selected by the ‘quality’ of the ...available PAM must be selected. When it comes to CRISPR experiments, therefore, you often must make a choice... all genomic landscapes should be editable with CRISPR technology.     Fig. 1: SpCas9 has sparse...
  37. Introducing an All-in-One CRISPR/Cas9 Vector System for Multiplex Genome Engineering

    Type
    Blog Post
    Published
    Nov. 12, 2014, 3:54 p.m.
    ...gRNA for CRISPR Genome Editing CRISPR-Cas9: Tips for Optimizing sgRNA Activity Lentiviral CRISPR Libraries...tandem. They went on to show that their CRISPR/Cas9-nuclease and CRISPR/Cas9-nickase vectors work successfully...based on earlier evidence showing that a CRISPR/Cas9 plasmid could be injected directly into mice for ...Find the Mulitplex CRISPR/Cas9 Assembly System Kit at Addgene here. Other Popular CRISPR Posts: How to ...established all-in-one vector construction system for CRISPR/Cas9-mediated multiplex genome engineering is now...multiplexity is one of the most advantageous properties of CRISPR/Cas9 compared to ZFNs and TALENs,” said Tetsushi...system offers ease and efficiency for all-in-one CRISPR/Cas9 vectors expressing up to seven guide RNAs ...
  38. Introducing Addgene's Microbiology Pages

    Type
    Blog Post
    Published
    June 13, 2016, 7:08 p.m.
    ...Collection page, you can browse for plasmids by species and find our guides, plasmid kits and other resources for...microbial research. Kits, guides, plasmids, and more We have Plasmid Kits for microbial work with fluorescent...choice. For more help with CRISPR, read our recent blog post explaining how CRISPR is being used for bacterial... To make it easier for you to find plasmids for your work, plasmids in the Microbiology Collection are... a useful plasmid that’s not in the collection? Tell us about it with our Suggest a Plasmid Form! Finally...Check out our Genome Engineering Overview and our CRISPR guide to find out how to use genome editing techniques...us at [email protected]. If you are looking for plasmids used in E. coli and yeast, you’re in luck! Addgene...
  39. Top Requested Plasmid of 2017 - pMD2.G

    Type
    Blog Post
    Published
    Jan. 10, 2018, 4:13 p.m.
    ...discovery. CRISPR is a great example (the top requested plasmids from 2015 and 2016 were CRISPR plasmids), but...reason, the top requested plasmid of 2017 is the lentivirus envelope plasmid pMD2.G from Didier Trono’...Plasmid technologies are constantly evolving, but sometimes a technology is so useful it forever enhances...’s lab! Lentivirus envelope vector pMD2.G This plasmid has been requested nearly 6,000 times (over 800...the broad usefulness of pMD2.G and VSV-G. This plasmid has been used in studies of the secretome, ubiquitin...ubiquitin ligase, cellular senescence, autophagy, CRISPR, and so much more (find the full, searchable list...to check out the Trono Lab website. If you have plasmids you’d like to deposit with Addgene, be sure to...
  40. Choosing a CRISPR Nuclease: Site Accessibility, Specificity, and Sensitivity

    Type
    Blog Post
    Published
    Nov. 5, 2019, 1:28 p.m.
    ... Visit our CRISPR plasmids and resources page Read our CRISPR guide Find CRISPR plasmids for mammalian...for My CRISPR Experiment? The three years flew by, but since then, scientists have adapted CRISPR nucleases... Read our CRISPR 101 blog posts Find more information about Cas proteins Download the CRISPR 101 eBook...previous blog post The PAM Requirement and Expanding CRISPR Beyond SpCas9 described the PAM specificity of ...the Cas9 to use in your experiments   The CRISPR drawer. So many options! Comic by Maya Kostman....to Cas9 While Cas9 remains the most widely used CRISPR nuclease, recent work has shown that alternative...to Cas9. As scientists continue to characterize CRISPR nucleases from a variety of sources, it is likely...
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