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  1. Plasmids 101: Mammalian Vectors

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    ...not guarantee 100% transfection efficiency. Stable transfection A stable transfection is used to create...into mammalian cells, a process called transfection. Transfection is somewhat comparable to bacterial transformation...the transfected plasmid to be expressed transiently. Since the DNA introduced in the transfection process...occurs and whether selection is necessary for transfected cells. Before getting into the mammalian plasmid...however, the techniques and reagents vary. Plasmid transfection into mammalian cells is fairly straightforward...material directly into the genome to form a stable transfection. Unlike bacterial transformation, scientsts ...reporter genes are often employed to easily monitor transfection efficiencies and expression levels in the cells...
  2. Plasmids 101: Control Plasmids

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    ...effects of the transfection itself (i.e., the vector used in transfection, transfection reagent, or transfection...experiments employ transfection, negative, positive, and replicate controls.  Transfection controls: empty...vector and internal control A transfection control measures transfection efficiency and enables observation... allows you to examine if the transfection reagents or the transfection process itself has any cytotoxic...Another type of transfection control is an internal control vector, which measures transfection efficiency....luciferase) that is either co-transfected with the test plasmid or transfected into a separate well of your...due to the original transfection conditions. Now that we have successfully transfected our cells (Figure...
  3. Multiplex Genome Editing with CRISPR-Cpf1

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    ... rely on transfection of more than one vector to express the gRNAs and Cas9. Co-transfections can lead...the usual transfection drawbacks: transient expression and needing to work with a transfectable cell line...Cassettes transfection gRNAs expressed from a polycistronic transcript  Requires co-transfection of Cas9...Cassettes transfection gRNAs expressed from a polycistronic transcript Requires co-transfection of Cas9  ... GFP tag were transfected on a single plasmid. This is versus 2.4% of cells transfected with a pool of...expression vectors which are often more difficult to transfect or package into viral vectors. Cas9 multiplexing...References Yamamoto Lab Golden Gate Assembly transfection One vector expresses Cas9 and up to 7 gRNAs...
  4. PEI Calculator for Planning AAV Packaging Transfections

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    ...prevent future headaches. To help you plan PEI transfections for AAV packaging, considering using this PEI...Calculator. AAV packaging typically requires transfecting three plasmids at specific molar ratios. To ...PEI calculator for AAV packaging Use the PEI transfection calculator for AAV packaging Select the plasmid...you would like to use for your AAV packaging transfection. In my lab we regularly use the ratios below...tissue culture dish you will be performing the transfection in: 15 cm dishes OR CF5 stacks Select how...how many dishes or stacks you plan to transfect: 1 to 10 Fill in experimental details on the spreadsheet... transfection...
  5. Plasmid Preps: Different Purity, Different Quantities, Different Uses

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    ...plasmids into mammalian cells? Use transfection grade DNA. Transfection is the process of inserting an ... Transformation grade DNA Cloning grade DNA Transfection grade DNA Figure 1: Transformation introduces...gene of interest into a plasmid backbone. Transfection grade DNA Figure 3: Need to introduce ... experiments. Another fundamental aspect for transfection grade DNA is the purity. In addition to being... tissue culture cell line viability, reduces transfection efficiency, and ultimately affects the quality... favor the removal of this agent to increase transfection success.  In conclusion, it is important for...transformation, transduction, conjugation, and transfection Resources on Addgene.org Read the molecular...
  6. Viral Vectors 101: Transductions

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    ...lipid-based or electrical-based transfection, most of the nucleic acid transfected will not stably integrate...picky when it comes to transfection/transduction methods. Some ‘difficult to transfect’ cells lines are amenable... triple T’s of biology are transformations, transfections, and transductions! In this blog we will discuss...a viral agent. Transductions are similar to transfections, processes which introduce foreign nucleic acid...containing the cargo of interest is then typically transfected along with viral packaging plasmids into a viral...with viral vectors. Typically, one day after transfection into the production cell line (depending on ...experiment. Using transduction vs. another method Transfection and transduction seem to achieve similar outcomes...
  7. Overcoming the Challenges of Lentiviral Production

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    ...changing transfection ratios can affect transfection efficiency. For some transgenes, transfection optimization...requirement for additional DNA can impact the transfection efficiency of the packaging cell line and thereby... titers. Requiring an additional plasmid for transfection can make these optimization experiments a bit...Producing lentivirus: it's all about the T's (transfection and titers) To produce lentivirus, the plasmids...structural elements, envelope, and transfer gene are transfected into a packaging cell line, usually a derivative...experiment. To improve titer, first optimize transfection conditions. As mentioned above, plasmid ratios...be adjusted to enhance titer. In addition the transfection method (i.e. polyethyleneimine, calcium phosphate...
  8. 5 Tips for Troubleshooting Viral Transductions

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    ...immediately following transfection. In other words, when exchanging the medium after transfecting cells, replace...can check if virus is being generated by your transfected packaging cells. This check can be performed ... your packaging cells have been successfully transfected and produced infectious virus, they may get infected...can be performed approximately 72 hours after transfection and should give rise to a surviving population...plasmid integration via recombination during transfection, and does not necessarily indicate the production...protein or resistance marker expression following transfection, higher-level expression after approximately... "Recombination events during integration of transfected DNA into normal human cells."Nucleic acids research...
  9. Cloning Mammalian Cells with the Agarose Method

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    ...growth rate/transfection efficiency is not known, this is easily achieved by splitting transfected cells into...specific cell line, and its transfection efficiency. We often trypsinize the transfected cells on the day after...after transfection into plates containing selection agent at different densities, then dispose of the plates...under-expressing clones. If GFP-encoding cDNA is co-transfected at a favorable ratio to the gene of interest ...expression characteristics from a population of transfected clones. The technique is applicable to a wide...
  10. CRISPR 101: Ribonucleoprotein (RNP) Delivery

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    ...site of interest. This is commonly performed by transfecting cells with a plasmid, such as PX459, which encodes...this method:     Cells must be amenable to transfection or viral transduction     Appropriate promoters... often be used in cells that are difficult to transfect, such as primary cells. Using RNPs can also alleviate... are detectable at high levels shortly after transfection, and are quickly cleared from the cell via protein...template. Other techniques, such as lipid-mediated transfection (B in the figure above), are in the early stages... this are Polyethylene Glycol (PEG) mediated transfection of protoplasts and biolistic bombardment of ...CRISPR studies in cells that are difficult to transfect or transduce. While using Cas9-gRNA RNPs may require...
  11. Plasmids 101: Transformation, Transduction, Bacterial Conjugation, and Transfection

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    ...   Transfection Unlike the last three methods which can be used in prokaryotes, transfection is only...transformation, transduction, conjugation, and transfection. Transformation, transduction, and conjugation...conjugation occur in nature as forms of HGT, but transfection is unique to the lab. Let’s take a look at these...only done in eukaryotic cells. Transfection is the process by which foreign DNA is deliberately introduced...
  12. Minigenomes - a Safe Way to Study Dangerous Viruses Like the Ebola Virus

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    ... lines that are highly transfectable.  The amounts of each plasmid transfected into cells are also extremely...each encoded on separate plasmids and are co-transfected into cells alongside a plasmid encoding the minigenome...expression levels of each gene by altering the amount transfected (see Technical Tips). Minigenome replication ...VP30, L, and the minigenome) are efficiently transfected into cells. All of these components are necessary... format). However, since plasmid quality and transfection efficiency may vary between labs, initial titration.... This can be accomplished in multiple ways: transfecting with an additional plasmid containing the T7...
  13. Hassle-free 96-well Format Epitope Tagging Using Cas9 Ribonucleoprotein

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    ...complex. This complete transfection mix, i.e. csRNP plus ssODN, is then transfected into stem cells. Cells... were transfected in 96-well format using an Amaxa Shuttle device; 5 days after the transfection, the ...Prepare cells for transfection, add csRNP and ssODN to the cell suspension, transfect and let cells recover...selection of transfection buffer and electroporation pulse program to achieve high transfection efficiency...delivered into cells; for each cell type, the transfection/delivery step needs to be optimized to achieve.... To calculate the tagging efficiency in the transfected cells, we count the number of tag-positive cells...
  14. Delivery Methods for Generating iPSCs

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    ...The typical drawbacks of using transfection will still exist: transfection efficiency is cell-type dependent...cells Limited genomic integration Multiple transfections required Need to sequence to verify there’s ...High Transgene-free and vector-free Multiple transfections required Protein Delivery DNA-Free Low High...cloning capacity of ~9-14 kb. This system is transfected into cells as a donor plasmid containing the ...with plasmid-based expression requires serial transfection of 1 or 2 plasmids that express the reprogramming...describes a protocol for generating iPSCs by plasmid transfection where 2 of 11 clones tested had plasmid integration...integration. Another challenge is that multiple transfection makes it difficult to control the dose of plasmid...
  15. Quick Guide to All Things Lentivirus

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    ...you don’t have any experience in transfection, CaCl2 transfection is a simple and cheap technique that...electrical (electric current forming membrane pores) transfection. These techniques are still used and efficiently...cells or non-dividing cells. To target these un-transfectable cells, labs use viral vectors and particularly...particles themselves. For this you will first need to transfect producing cells, usually 293T cells, with your...packaging plasmids. For this, you can use the transfection reagent you are most comfortable with. If you...that should work well. Quickly after transfection (4-8h), cells start releasing viral particles into the...the supernatant containing viruses 24h after transfection. This supernatant can be stored at 4 °C or can...
  16. CRISPR/Cas9 FAQs Answered!

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    ...positively transfected. Alternatively, you can use a selection marker to select transfected cells (for...Before starting your experiment, consider co-transfecting with GFP. This allows you to sort for GFP-positive...resistance cassette, such as PX459). After you co-transfect the CRISPR/Cas system with your homologous recombination...
  17. CRISPR 101: Mammalian Expression Systems and Delivery Methods

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    ...system. CRISPR reagents can be delivered via transfection, nucleofection, viral transduction or injection...or gRNA in a mammalian cell line that can be transfected at high efficiency. Lentiviral transduction...mammalian cell lines. Useful for difficult to transfect cell types and can be used in vivo. A common choice... of common  delivery methods below: Chemical transfection   Lipid mediated Cationic polymers Calcium...Medium Difficulty Easy Easy Easy Physical transfection   Electroporation / Nucleofection Microinjection...
  18. Google Forums Round Up: First Impressions of NgAgo

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    ...used by respondents (transfection method, amount of each component per transfection etc.). Take Pooran'...an ssDNA guide. Therefore, researchers must co-transfect cells with 5’-P-ssDNA guides and an NgAgo expression...delivery methods. Researchers can conveniently transfect/inject cells with in vitro preassembled Cas9/gRNA...researchers will have to carry out repeated transfections with the ssDNA guide, although many may find...
  19. Your Top Requested Plasmid in 2016!

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    ...enables selection of cells with the plasmid post transfection. The 2A "self cleaving" peptide causes the ribosome...backbone. This particular backbone can be used to transfect a variety of mammalian cells and can be modified...can be used to test for SpCas9 expression post transfection by western blot. Overall, this is a versatile...
  20. Viral Vectors 101: Producing Your rAAV

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    ... performed 12–18 hours post-transfection to help remove toxic transfection reagents and keep the cells...HEK293T cells, expressing Ad E1A and E1B, can be transfected with your transfer plasmid, carrying your gene...helper plasmids, commonly called “triple plasmid transfection” (Figure 1).    Figure 1: Overview of key steps...cells happy. Harvesting virus Once you have transfected your cells, wait 2–5 days and then collect the supernatant...
Showing: 1 - 20 of 144 results