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  1. 27 Hot Plasmids from 2016

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    Blog Post
    ...introduced a new assembly cloning platform called GMAP (Gibson assembly-based modular assembly platform). GMAP... the FusX assembly system from Stephen Ekker’s lab, is a modified version of the Golden Gate TALEN kit...developed SapTrap. The SapTrap system uses golden gate assembly to produce single plasmid targeting vectors... destination vectors using low-cost, one-pot golden gate cloning that results in the creation of many ...GMAP is based on the Gibson Assembly method, which allows for easy assembly of DNA fragments by utilizing...streamlines the assembly of TALE repeats into a single-tube, 3 day process by utilizing pre-assembled trimers ...effector scaffolds previously constructed for the Golden Gate TALEN and TAL Effector Kit 2.0. Ma, et al. Hum...
  2. Microbiology Resources

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    Collection
    ... Labs Yarrowia lipolytica Golden Gate tool kit : Integrative vector assembly of up to three transcription...Toolkit - Borodina Lab Golden GATEway cloning system - Wittbrodt Lab MultiSite Gateway Kit : Creating three-part...deposited tools and resources, or read our guide on assembly standards. Browse Plasmids by Microbe System Plasmids...chromosomes - Endy and Shearwin Labs Ralstonia-GG-Kit : Assembly of Ralstonia solanacearum species complex (Rssc...circuit design in E. coli - Freemont Lab MoClo-YTK : Assembly of single and multi-gene constructs for S. cerevisiae...perform your synbio experiment. Synthetic Biology Assembly Standards Guide Bacterial Expression Systems :...oleaginous yeast Y. lipolytica - Rossignol Lab Yeast Gateway kit : 285 vectors for expression, markers, fusion...
  3. Early Career Researcher Toolbox: Free Online Molecular Biology Tools

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    Blog Post
    ...Data-optimized Assembly Design (DAD): This tool designs overhang sets for high complexity Golden Gate Reactions... for Goldengate cloning   Design primers for In-Fusion Cloning Design primers for Gibson Assembly and ... vector database: Find sequences for plasmids assembled from publications and commercially available sources...and NEB HiFi DNA Assembly  OligoAnalyzer Tool from IDT: For hairpin analysis, Tm and primer dimer estimation...methods, such as restriction enzyme cloning, Gibson assembly, or In-Fusion cloning.  NEB Ligation Calculator...
  4. Plasmids 101: Sequence and Ligation Independent Cloning (SLIC)

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    Blog Post
    ...such as Golden Gate assembly, may also be beneficial. SLIC is most often compared to Gibson assembly, a cloning...multicomponent assembly, as fragments with overlapping sequence homology can be assembled in a unique order...multicomponent assembly have 5′ or 3′ sequence homology to each other, they may be assembled incorrectly.... one option is to perform a hierarchical assembly, assembling fragments in multiple steps to avoid using...required for Gibson assembly. SLIC is a standardized method for multi-fragment DNA assembly, and its low cost... doing large amounts of cloning. Assembly is scarless, unlike Gateway cloning, and the method’s flexibility... cheap, standardized, and rapid multi-part DNA assembly method. Read on to learn how to use it in your...
  5. REPLACR Mutagenesis: Replacing In Vitro Recombination Methods

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    Blog Post
    ...Other Plasmid Cloning Techniques like SLIC and Golden Gate Cloning Learn How to Verify Your Plasmid Read...product is then digested and ligated into an appropriate vector. Gibson Assembly, GeneArt Cloning, and SLIC...insertions require complicated, often costly in vitro assembly methods. A new method, REPLACR-mutagenesis, harnesses...substitutions - at the same efficiency as Gibson Assembly and GeneArt cloning - but at a much lower cost...mutagenesis methods Current SDM methods rely on in vitro assembly. To make a point mutation, you design two oligonucleotide...SLIC can all be used to assemble multiple fragments, but these methods can be expensive because they require...al. wondered if, instead of relying on in vitro assembly, they could make the E. coli do the work by using...
  6. Synthetic Biology - Overview

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    Collection
    ...and more. Also contains pre-assembled genetic circuits such as logic gates and higher level gene networks... Cloning Kit GreenGate Cloning System (Plant) MoClo Modular Cloning Modular PUF Assembly Kit Optogenetics...SynBio Resources SynBio Home Browse All SynBio Assembly Standards SynBio Blog Genome Engineering SynBio...James Collins Tom Ellis Drew Endy Tobias Erb Susan Golden John Gray Jeff Hasty Dieter Jahn Alfonso Jaramillo...Quorum Sensing Ellis Lab GeneGuard Endy Lab Logic Gates , BIOFAB Promoter/BCD Kit , and pOSIP Plasmid Kit...Recombinant Phosphoprotein Kit S. cerevisiae Advanced Gateway Destination Vectors TAL Effectors Zinc Finger Consortium...
  7. Troubleshooting Your Plasmid Cloning Experiment

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    Blog Post
    ...Gibson Assembly, Golden Gate etc.), and try to find the simplest way to do it (i.e. avoid assembling too ...gel or by nanodrop to assemble the  fragments based on their molar ratio. Assembly of the fragments There...can generate the parts of DNA that you want to assemble together in a combination of different ways according...There are multiple ways you can assemble the different parts of a plasmid based on the cloning strategy...
  8. Plasmid Tools for Microbiome Studies

    Type
    Blog Post
    ...consists of modular parts that are assembled with Golden Gate Assembly. They built this toolkit upon the...relies on the assembly of fluorescent proteins into one bright particle that segregates into one cell ...microbiome systems. Find the toolkit for modular assembly of broad host range plasmids Counting cell division...fused the red fluorescent protein (RFP) to a self-assembling protein (SAP) such as a bacteriophage shell protein...microbiome bacteria with a toolkit for modular assembly of broad-host-range plasmids." ACS synthetic biology...
Showing: 21 - 30 of 42 results