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Showing: 261 - 280 of 812 results
  1. Developing a cold tolerant E. coli using specialized chaperones

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    Blog Post
    ...out of their optimally suited temperature ranges and make them grow better at suboptimal ones, which could...are your regular next-door microbes which grow optimally in moderate temperatures (usually defined between...worth the trouble.  Enter ELSA: E. coli Learning Suboptimal Acclimatisation To resolve this impasse, our ...mesophilic chaperones would not function well under suboptimal conditions. This means recombinant proteins can...
  2. Antibodies 101: Monoclonal Antibodies

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    ...hybridomas come from animals that were immunized against the target protein. Animals are first injected ...injected with a small peptide that represents a short, unique amino acid sequence found in the protein, or, are.... After isolating the B cells from an immunized animal, those B cells are fused to myeloma cells at a ...develop a hybridoma than it does to immunize an animal and recover polyclonal antibodies (Lipman et al...
  3. AAV Q&A with Tim Miles

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    ...reported titer by either method so to ensure equal animal dosing, we advise that users keep titering method...per mouse to get phenotypes (that’s almost 100ul/animal for the PHP.eBs that we have in house!), which ... injection volumes with your IACUC committee.  Animal Models Q9: Is there any difference in transfection...to the development of neutralizing antibodies in animal models. All of our engineered AAV are presently...creative ways. The continued development of more and smaller CRISPR tools is an exciting area for future AAV...
  4. CRISPR 101: Non-Homologous End Joining

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    ... next steps in the process involve repairing chromosomal DSBs. It is important to know that cells possess...generated in the course of repair by NHEJ are typically small (1-10 bp) but extremely heterogeneous. There is ...cleavage, which may interfere with loading of Ku and normal NHEJ activity. Other factors can also influence...EA, Giovannangeli C, Jasin M, Brunet E (2014) Chromosomal Translocations in Human Cells Are Generated by...Repair CRISPR Protocol for Genomic Deletions in Mammalian Cell Lines [Video] Pooled CRISPR Libraries Offer...
  5. Form Your Own Peer Mentoring Group: A How-To Guide for Scientists

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    ...mentees who meet together for an 8 month formal program. After the formal program ends, some 50% of these groups...supporters and advisors? I tried to start a more formal mentoring program at my company, but there weren't...awkward to ask someone for the time commitment of a formal mentoring relationship or there aren’t enough senior...for one another (trainees never get to present formally often enough) and give honest, critical feedback...
  6. Viral Vectors 101: An Introduction to AAV

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    ...be used to express genes of interest in cell and animal models. AAVs are non-pathogenic, do not integrate...hand, if you’re interested in expressing multiple small genes, you can design single rAAV vectors with multiple...viral cargo is usually quite stable and in some mammalian tissues has shown expression for several years...host genome and therefore the transduced gene is episomal and does not divide and replicate in the same ...2013.   scAAV If your gene of interest is truly small (<2.5Kb) and you need expression in a hurry, self-complementary...
  7. Hot Plasmids April 2018 - Protein Degradation, Nanoscopy, FIRE-Cas9, and Yeast Expression Tools

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    ...ubiquitin ligase, is the basis of TRIM-away. In normal physiology, TRIM21 recruits ubiquitin and the proteasome...tested multiple methods for TRIM-Away delivery. For small cell populations, co-microinjection of TRIM21 protein... et al. Cell. 2017. PubMed PMID: 29153837. Endosomal pH sensors for STED nanoscopy Article contributed...contributed by Eric J. Perkins Listen to Endosomal pH Sensors podcast segment The first Addgene plasmid deposit...using conventional light microscopy due to their small size (<250 nm), and studying endocytosis is further...
  8. Supporting Rare Disease Research with the 2020 BeHEARD Awards

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    Blog Post
    ...observed abnormal cell migration and contraction. The lab hypothesized that this is abnormally deregulated... It is estimated that CTD is the second cause of male intellectual disability after Fragile X. There is... collection to perform a functional screen in mammalian cells to identify any solute channels that can...team will be able to validate their findings in mammalian cells with both human and murine targets thus ...
  9. xCas9: Engineering a CRISPR Variant with PAM Flexibility

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    ...Characterizing xCas9 in mammalian cells Hu et al. compared xCas9 activity with wt SpCas9 in mammalian cells, finding...NGT, NGC, GAA, and GAT PAMs is improved, with a smaller increase in NGA editing. Adenine base editor xCas9...improvements at NG and GAT PAMs. xCas9 3.7 Activity in Mammalian Cells Construct NGG PAM NGA PAM NGC ...out our CRISPR Guide Find CRISPR Plasmids for Mammalian Systems Learn about CRISPR History ...
  10. Fluorescent Tagging of Endogenous Genes with SapTrap

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    ...localization, protein aggregation, or disruption of normal protein function, and ultimately misinterpretation...endogenous genes of interest to better understand normal protein function. However, CRISPR protein tagging...genomic loci in other model systems, including mammalian cells. CRISPaint (CRISPR-assisted insertion ...TagGFP2, TagBFP, TagRFP, and T2A-TurboGFP-PEST), and small epitope tags (HA, Myc, Strep tag II, AviTag, HaloTag...fluorescently tag markers of cellular structures in mammalian cells. These plasmids use fluorescent proteins...
  11. Starter guide to induced pluripotent stem cells (iPSCs) part 1:  A renaissance in regenerative medicine

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    ...the embryonic and extraembryonic cell types. In mammalian development, cells found in the zygote through... blastocyst [6]. They are isolated mostly from abnormal and/or supernumerary preimplantation embryos that...cells, these multipotent stem cells are located in small quantities in specific “stem cell niches” found ...of peripheral blood. Typically, there is a very small number of ASCs in each tissue and once removed from...showed the successful generation of human iPSCs from dermal fibroblasts via retroviral and lentiviral infections...
  12. Addgene's Cancer Collection Pages Connect the Research Community

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    ... group of genes/proteins that, when expressed, normally encourage cell survival, growth and proliferation...an organism that both classes of genes function normally to maintain balance – encouraging cells to grow...has already demonstrated that a number of novel small molecules can bind directly, albeit weakly, to K-Ras...up on these promising results and customize the small molecules for a higher affinity fit. Kevan Shokat...PMCID: PMC3354961. 5. Sun, Qi, et al. "Discovery of small molecules that bind to K‐Ras and inhibit Sos‐mediated...
  13. Google Forums Round Up: First Impressions of NgAgo

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    ... dangerous, non-physiological temperature for mammalian cells and one which diminishes the endonuclease...PAM sequence might not always be available at an optimal distance from the target site. For example, NGG...can indeed be optimized for genome editing in mammalian cells. However, the fact that most of the researchers...rapidly degraded by the cellular machinery, leaving a small amount of active NgAgo/ssDNA complex in the cell...It is possible that, during translation, only a small fraction of nascent NgAgo protein molecules manages...
  14. AAVs in Retinal Gene Therapy

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    ..., including the RPE65 gene responsible for an autosomal recessive, severe, childhood-onset form of blindness...cloning of the RPE65 gene, a naturally occurring animal model, the RPE65−/− dog, was characterized and ...expression in non-dividing cells because they remain in episomal form in the cell’s nucleus. But since nothing...perfect, neither is AAV. Its main limitation is the small size of its DNA cargo - 4.8 kb at most - which means...editing AAV: A versatile tool for gene expression in mammals Resources at Addgene.org Find AAV plasmids Find...
  15. Cpf1: A New Tool for CRISPR Genome Editing

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    ...Cpf1 orthologs that display cleavage activity in mammalian cells. Like Cas9 nucleases, Cpf1 family members...additional tracrRNA. Once they had determined the minimal elements of CRISPR-Cpf1, Zetsche et al. turned ...Cpf1 nucleases would exhibit in vivo activity in mammalian cells. From 16 diverse Cpf1 candidates, Zetsche...function. Since both Cpf1 and its guide RNAs are smaller than their SpCas9 counterparts, they will also ...efficiency of two Cpf1 orthologs known to be active in mammalian cells, LbCpf1 and AsCpf1. In both reports, on ...
  16. Transferable Skills Guide: External Collaborations

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    ...found that many researchers feel that they lack formal training in a variety of transferable skills. At...non-research context, especially when considering small to mid-sized companies and organizations. Addgene...comfort zone and slowly expand from there. Start small: Collaboration opportunities within an organization...someone else has realized this too. Begin with informal conversations about your ideas and don’t be afraid...for a meetup or recruit volunteers for your local animal shelter. There are many opportunities so just pick...
  17. Transferable Skills Guide: Career Planning Resources

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    ...found that many researchers feel that they lack formal training in a variety of transferable skills. At...many graduate and post-doctoral programs lack any formal or mandatory professional development training....same thing? Make an effort to meet people. Attend smaller talks within the bigger conference, especially ...you should have a business card; it’s a bit more informal, and a lot easier to hand out than a CV or resume...the connection you made at the job fair when you formally apply for the position. This post on Business ...
  18. Controlling for Off-target Effects with a New Genome-wide CRISPR Screen Design

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    ...off-target cutting than full-length guides (19-20bp)?  Small-scale studies (Tsai et al., Fu et al.) suggest 17...libraries Overview of Library To better define the optimal conditions for CRISPR knockout screens, the Bassik...safe-targeting guides as a control will result in a smaller list of true positive hits than when using non-...truncated gRNAs have improved specificity with only a small loss of on-target activity in high-throughput screens.... 5. Bassik, Michael C., et al. "A systematic mammalian genetic interaction map reveals pathways underlying...
  19. Tips for CRISPR Gene Editing in Mice

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    ... has expanded since its adaptation for use in mammalian cells in 2012-2013. Researchers are now using ...Now that you’ve validated your gRNAs for use in mammalian cells, it’s time to use them in mouse embryos....method was developed as the use of CRISPR/Cas9 in mammalian cells was being explored and it allowed control...that we’ll learn much more from our favourite mammalian model organisms in the near future.  Many thanks...Design You gRNA Find CRISPR Plasmids for Use in Mammalian Cells Check out All of Our CRISPR Resources   ...
  20. Plasmids 101: E. coli Strains for Protein Expression

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    ... TB or 2XYT is optimal because of the high cell-density they support; however, minimal media supplemented...with proper protein folding, and deal with sub-optimal codon usage (Table 1) A few mutations are common...contains 7 additional tRNAs for rare codons not normally used in E. coli. Expression vector cannot have...Analyze your expression conditions by setting up a small-scale expression experiment to test variables such...
Showing: 261 - 280 of 812 results