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  1. Sequencing Options for CRISPR Genotyping

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    Blog Post
    ...View Our CRISPR Guide Pages Find CRISPR Plasmids for Your Experiments Get Ready-to-Use CRISPR Lentivirus...steps in the CRISPR experimental process is validating edits. Regardless of which CRISPR genome editing...discussed in CRISPR 101: Validating Your Genome Edit, there are a variety of options for CRISPR genotyping...Perform Genome-Wide Screens with CRISPR Generate Mouse Models with CRISPR/Cas9 Additional Resources on ...target gene. The validation process, also known as CRISPR genotyping, is critical to demonstrating causal...biology. It is key to address these concerns as CRISPR use grows across the life sciences and to establish...moves toward standardized thresholds for validating CRISPR experiments, many are turning to next-generation...
  2. Bikard Lab - CRISPR Repression Collection

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    Collection
    ...Lab - CRISPR Repression Collection Bikard Lab CRISPR Repression Plasmids You may also like... CRISPR Guide...Guide CRISPR Protocols gRNA Design Tools CRISPR Blog Posts The David Bikard Lab at the Institute Pasteur...a plasmid‐borne CRISPR array coding for guide RNAs (diamonds) interspaced with CRISPR repeat motifs (squares...From the Bikard Lab, CRISPR plasmid collection for modulating expression levels of two targets independently...Pasteur has deposited a collection of CRISPR arrays to modulate the expression levels of two targets independently... DNA-binding protein dCas9 is expressed along a CRISPR array that contains 20 bp "addresses", where dCas9...collection comprises 20 plasmids, each carrying two CRISPR guides. The first one binds to sfgfp with either...
  3. Pushing the Limits of DNA Assembly

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    Blog Post
    ...Resources on Addgene.org Browse Our CRISPR Resources Find Validated gRNAs Browse All Plasmids ...of base pairs. Cloning sgRNAs Generating constructs to produce sgRNA for CRISPR experiments can be laborious... plating, screening and generation of sgRNA. Generation of sgRNA libraries, with maximum complexity, is...constructs with multiple point mutations Cloning sgRNAs Production of Yeast Expression Cassettes Generating...synthetic oligo to generate a single-guide RNA (sgRNA). Using only one single-stranded oligo, instead ...to create a double-stranded oligo. Generating an sgRNA construct becomes as simple as combining your favorite...
  4. CRISPR Guide

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    Guide
    ... of unique gRNAs. gRNA design for CRISPR libraries is usually optimized to select for gRNAs with high ... Addgene Blog CRISPR topic page How to design your gRNA for CRISPR genome editing CRISPR 101: Homology...basic CRISPR mechanism Engineered CRISPR systems contain two components: a guide RNA ( gRNA or sgRNA ) and...Guide CRISPR Guide Jump To: CRISPR Guide Overview CRISPR Basics Small Edits Large Edits Genome-Wide Screening...generating gRNAs makes CRISPR one of the most scalable genome editing technologies, making CRISPR perfect...Figure 7: Overview of CRISPR transposases Browse Plasmids: CRISPR transposases CRISPR Recombinases and Integrases...screening using CRISPR libraries What Are Pooled Lentiviral CRISPR Libraries? Pooled lentiviral CRISPR libraries...
  5. How to Deposit Your Plasmids with Addgene

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    Blog Post
    ... Encodes gRNA/shRNA A plasmid with one or more gRNA or shRNA sequences cloned into it. gRNAs are used...used for directing CRISPR/Cas9 to a targeted genomic location, while shRNAs are used to knockdown expression...gene contained within your insert (or targeted by a gRNA/shRNA) and select the species that the gene or insert...
  6. Typing CRISPR Systems

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    Blog Post
    ...blog CRISPR 101: Cas9 vs. The Other Cas(s) CRISPR 101: RNA Editing with Cas13 Build your CRISPR vocabulary...Additional resources on Addgene.org CRISPR guide CRISPR plasmids CRISPR references ...Classification Structure Principles of CRISPR classification While CRISPR systems now seem neatly organized...versus class 2 There are two CRISPR classes: Class 1 and Class 2. Class 1 CRISPR systems use multi-Cas effectors... Type I CRISPR systems make up the majority of Class 1, and are the most common type of CRISPR overall...complex of the CRISPR types and is thought to be the common ancestor of all other CRISPR systems. Type ...immune functions that other CRISPR types do, due to a lack of canonical CRISPR features (Pinilla-Redondo...
  7. How to Keep a Lab Notebook for Bioinformatic Analyses

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    Blog Post
    ...Protocols for Your Next Experiment Find Our List of CRISPR gRNA Design Tools ...Save Time and Track Your Experiments Try out the CRISPR Software Matchmaker Additional Resources on Addgene.org...
  8. Plasmid Collections

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    Collection
    ...pooled libraries. Pooled Library Types cDNA shRNA CRISPR gRNAs Depositor Collections A modular set of plasmids...plasmids, kits, and pooled libraries. Find tools for CRISPR, fluorescent proteins, optogenetics, biosensors... Genome Engineering Genome Engineering Overview CRISPR Cre-lox TALENs Zinc Fingers Luminescence Fluorescent...view all collections. Depositor Collection Types CRISPR Fluorescent Proteins Protein Expression Synthetic...
  9. Plasmids 101: Gibson Assembly and Other Long-Homology Based Cloning Methods

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    Blog Post
    ...mixing and matching of parts. Gibson assembly meets CRISPR Gibson can be adapted to more complicated cloning...use of Gibson assembly combined with the popular CRISPR technology and is described in a recent publication...linearized vector, the Cas9 enzyme along with a specific gRNA was used to cleave the 22kb vector. When followed...second example of using Gibson Assembly along with CRISPR was also described recently (Jiang et al. 2015)...chromosome (up to 100 kb) were specifically cut out via CRISPR and then assembled into a vector using Gibson assembly...homology with the bacterial chromosome fragments. CRISPR cutting was used to circumvent the need to PCR ...Wang A, Li K, Wang B, Jin S, Reiser M, Lockey RF. CRISPR/Cas9 nuclease cleavage combined with Gibson assembly...
  10. Worm Expression Resources

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    Collection
    ... individually. CRISPR Read Addgene's CRISPR Guide for a general introduction to CRISPR technology. Addgene's...Addgene's worm CRISPR resources include plasmids expressing Cas9, empty gRNA backbones, and constructs ... tag insertion using CRISPR/Cas9 and the selection of C. elegans strains. CRISPR plasmids from John Calarco's...genome editing in C. elegans via a CRISPR-Cas9 system. Cloning-free CRISPR for C. elegans , which uses purified...Browse plasmid tools, kits, and resources (such as CRISPR and synthetic biology collections) for use in C... feeding worms bacteria expressing dsRNA or use CRISPR/Cas9 gene editing to easily engineer specific transgenic...contain tools for use in worm research. This includes CRISPR, RNAi, empty backbones, fluorescent proteins, and...
  11. Microbiology Resources

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    Collection
    ...Microbiology General CRISPR Resources Read our CRISPR Guide for a general introduction to CRISPR technology. Check...Check out our CRISPR reference page for CRISPR resources, such as depositor protocols and gRNA design software...software. Addgene yeast CRISPR resources Bacterial CRISPR Resources The CRISPR technology was developed...synthetic biology. CRISPR Resources : Find essential background information on using CRISPR in your lab, specific...Find CRISPR tools for use in genome editing of bacteria. CRISPathBrick Multiplex Plasmid : CRISPR expression... specific CRISPR tools for genome editing in bacteria, and more. Synthetic Biology : Browse our deposited...editing is not always straightforward. Read our CRISPR Methods for Bacterial Genome Engineering blog post...
  12. Plasmids 101: Modular Cloning Applications and Kits

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    Blog Post
    ...repurposed for CRISPR applications (gene insert = Cas9 + gRNA), Addgene distributes specialized CRISPR kits too...more of these kits, as there are many options! CRISPR CRISPR-Cas can harness the power of MoClo to expand... the most intuitive CRISPR MoClo application is to assemble multiple unique sgRNAs into a multi-TU targeting...including conditional gene expression, multiplexed CRISPR, and chromosomal integration of larger expression...edit optimization, and more. While there are many CRISPR-Cas libraries and tools available for certain model...biologists, Addgene has not one, not two, but three CRISPR MoClo kits for plants that work for both monocots...MoClo can help you achieve it! More recently, a CRISPR MoClo kit termed Fragmid was developed for mammalian...
  13. Hassle-free 96-well Format Epitope Tagging Using Cas9 Ribonucleoprotein

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    Blog Post
    ...Enhanced CRISPR/Cas9-mediated precise genome editing by improved design and delivery of gRNA, Cas9 nuclease...Resources on Addgene.org Browse CRISPR plasmids Check out our CRISPR guide pages Find ready-to-use Cas9...intended target site. With the widespread adoption of CRISPR/Cas9 technology and rapid improvements in the field...delivery Epitope tagging of mammalian genes using CRISPR depends on successful delivery of three reagents...using custom synthetic two-part cr/tracrRNAs for CRISPR experiments (in collaboration with Integrated DNA...tagging is scalable to 96-well format. Off-the-shelf CRISPR reagents for the knock-in experiment were pre-assembled...csRNP knock-in experiments If your lab is new to CRISPR/Cas9 experiments, there is no need to worry at ...
  14. Guide to Using Pooled Libraries

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    Guide
    ...Using CRISPR/Cas9 Lentiviral CRISPR Libraries Enable Genome-Scale, Knockout Screening Pooled CRISPR Libraries...protocol. Read our CRISPR guide for more information on genome-wide screening with CRISPR/Cas9 . Browse our...each plasmid contains a unique cDNA. In shRNA or gRNA libraries, each plasmid contains a unique gene targeting...library from the Moffat lab has over 175,000 different gRNA-containing plasmids). Amplifying and Using the Library...of published selection mechanisms for lentiviral CRISPR libraries include: resistance to the anti-cancer... screen. The figure above is an outline of how a gRNA library is used. Below are the general steps to ...virus, make virus; this creates a pooled lentiviral CRISPR library. Apply pooled library to cells. DIVERGE...
  15. Zhang Lab CRISPR Page

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    Collection
    ...CRISPR Cas9 gRNA plasmids from the Zhang lab... Genome Engineering CRISPR Zhang Lab CRISPR Plasmids Zhang...Zhang Lab CRISPR Plasmids Available from Addgene Zhang Lab CRISPR Resources Tips for and FAQs about the ...Zhang Lab CRISPRs Browse All Zhang Lab Plasmids Zhang Lab Website You may also like... CRISPR Guide CRISPR...CRISPR Protocols gRNA Design Tools CRISPR Blog Posts Jump to: SpCas9 Plasmids GeCKO SAM AAV - In vivo Delivery...phages and plasmids. CRISPR loci in microbial hosts contain a combination of CRISPR-associated (Cas) genes...specificity of the CRISPR-mediated nucleic acid cleavage. We have harnessed the type II CRISPR nuclease system...
  16. Bacterial Expression Systems

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    Collection
    ... list of our bacterial CRISPR plasmids, see here . pgRNA-bacteria 44251 CRISPR Stanley Qi Expression of...Purpose pCas9 42876 CRISPR Luciano Marraffini Bacterial expression of Cas9 nuclease gRNA. For a more comprehensive...list of our bacterial CRISPR plasmids, see here . pwtCas9-bacteria 44250 CRISPR Stanley Qi Anhydrotetracycline...can be combined with expression of a gRNA from a plasmid like pgRNA-bacteria to knock down endogenous gene...alter bacterial genomes. From recombineering to CRISPR , this collection contains a variety of tools to... of customizable guide RNA (gRNA) for bacterial gene disruption or knockdown. For a more comprehensive...comprehensive list of our bacterial CRISPR plasmids, see here . pGRG Series Various Plasmids Tn7 Transposition Nancy...
  17. Twenty Years of Sharing: Expanding Accessibility

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    Blog Post
    ...Replication What is a Plasmid? How to Design Your gRNA for CRISPR Editing The Promoter Region - Let's Go! How...Educational Resource Top Five by Views Guides CRISPR Guide Lentiviral Guide AAV Guide Optogenetics Guide...primers to help users get started with tools like CRISPR, lentivirus, and optogenetics — and shared the ...Addgene blog Twenty Years of Addgene Sharing: CRISPRTwenty Years of Sharing: Addgene's Viral Vector Service...
  18. Zebrafish Plasmid Collection

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    Collection
    ...Collection CRISPR Please refer to Addgene's CRISPR Guide for a general introduction to CRISPR technology... zebrafish CRISPR resources for a full selection of plasmids expressing Cas9 and empty gRNA backbones....examples of useful zebrafish CRISPR resources can be found below: UFlip CRISPR targeted integration vectors...for Targeted Integration Using CRISPR/Cas9 - Jeffrey Essner Lab CRISPR-Cas/RNA-Guided Nuclease (RGN) expression...Joung Lab CRISPR/Cas9-based conditional mutagenesis in zebrafish - Wenbiao Chen Lab A CRISPR/Cas9 Vector...modified CRISPR-Cas9 system - Shuo Lin Lab Re-purposed Ac/Ds transgenic system enabling CRISPR/dCas9-interference...for the laboratory use of zebrafish. CRISPRz - A database of CRISPR/Cas9 target sequences that have been...
Showing: 181 - 200 of 233 results