Addgene pPSU30 Sequencing Result - Sequence Analyzer Skip to main content
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Sequence Analyzer: pPSU30 Sequencing Result


Map View

NsiI (11) AfeI (3542) AclI (3469) BpmI (3272) PvuII (3206) pGEX 3' (3151 .. 3173) PfoI (3150) PflFI - Tth111I (3051) BsaAI (3045) BstZ17I (3026) AccI (3025) pRS-marker (2991 .. 3010) L4440 (2894 .. 2911) PciI (2796) pBR322ori-F (2641 .. 2660) PspFI (2496) BseYI (2492) AgeI (2125) RsrII (2123) AhdI (2005) BspDI * - ClaI * (12) T7 (27 .. 46) BspEI (71) Eco53kI (79) BanII - SacI (81) NdeI (117) XcmI (152) BamHI (338) EcoNI (410) AvaI - BsoBI (454) EagI (513) BclI * (666) PflMI (691) BsmI (767) TsoI (788) BstEII (799) NgoMIV (836) NaeI (838) BsrGI (926) Acc65I (932) KpnI (936) MluI (938) BssHII (944) BlpI (1003) T7 Term (1000 .. 1018) StyI (1025) EcoO109I (1030) SspI (1200) MfeI (1326) BtsI - BtsαI (1606) pPSU30 3568 bp

Sequence View

NsiIBspDI*ClaI* 60 T7 promoter T A A T A C G A C T C A C T A T A G G G T7 g g c a c c a t g c a t c g a t c c c g c g a a a t t a a t a c g a c t c a c t a t a g g g a g a c c a c a a c g g t t c c g t g g t a c g t a g c t a g g g c g c t t t a a t t a t g c t g a g t g a t a t c c c t c t g g t g t t g c c a a

NdeIBspEIEco53kIBanIISacI 120 RBS M t c c c t c c g g c t c c g g a g a g c t c a a t a a t t t t g t t t a a c t t t a a g a a g g a g a t a t a c a t a t a g g g a g g c c g a g g c c t c t c g a g t t a t t a a a a c a a a t t g a a a t t c t t c c t c t a t a t g t a t a

XcmI 180 1 5 10 HHHHHHHHHH (in frame with 10xHis) GSADNKFN 10xHis GSHHHHHHHHHHGSADNKFN g g g t a g t c a t c a t c a c c a c c a t c a c c a t c a t c a t c a t g g t a g c g c a g a t a a c a a g t t c a a c c c a t c a g t a g t a g t g g t g g t a g t g g t a g t a g t a g t a c c a t c g c g t c t a t t g t t c a a g t t

240 (in frame with 10xHis) KEQQNAFYEILHLPNLNEEQ KEQQNAFYEILHLPNLNEEQ t a a a g a a c a g c a g a a c g c c t t c t a t g a a a t t c t g c a t c t g c c g a a t c t g a a t g a a g a a c a a t t t c t t g t c g t c t t g c g g a a g a t a c t t t a a g a c g t a g a c g g c t t a g a c t t a c t t c t t g t

300 (in frame with 10xHis) RNGFIQSLKDDPSQSANLLA RNGFIQSLKDDPSQSANLLA g c g t a a t g g t t t t a t c c a g a g c c t g a a a g a t g a t c c g a g c c a g a g c g c a a a t c t g c t g g c c g c a t t a c c a a a a t a g g t c t c g g a c t t t c t a c t a g g c t c g g t c t c g c g t t t a g a c g a c c g

BamHI 360 (in frame with 10xHis) EAKKLNDAQAPKGSADNKFN EAKKLNDAQAPKGSADNKFN c g a a g c a a a a a a a c t g a a t g a t g c a c a g g c a c c g a a a g g a t c c g c t g a t a a c a a a t t t a a g c t t c g t t t t t t t g a c t t a c t a c g t g t c c g t g g c t t t c c t a g g c g a c t a t t g t t t a a a t t

EcoNI 420 (in frame with 10xHis) KEQQNAFYEILHLPNLTEEQ KEQQNAFYEILHLPNLTEEQ c a a a g a g c a a c a a a a c g c c t t t t a c g a g a t c c t g c a t t t a c c g a a c c t g a c c g a g g a a c a g t t t c t c g t t g t t t t g c g g a a a a t g c t c t a g g a c g t a a a t g g c t t g g a c t g g c t c c t t g t

BsoBIAvaI 480 (in frame with 10xHis) RNGFIQSLKDDPSVSKEILA RNGFIQSLKDDPSVSKEILA g c g c a a c g g c t t t a t t c a g t c a c t g a a a g a c g a c c c g a g t g t g a g c a a a g a a a t t c t g g c c g c g t t g c c g a a a t a a g t c a g t g a c t t t c t g c t g g g c t c a c a c t c g t t t c t t t a a g a c c g

EagI 540 (in frame with 10xHis) EAKKLNDAQAPAGGSGSGSG EAKKLNDAQAPAGGSGSGSG a g a g g c c a a a a a g c t g a a c g a t g c c c a a g c t c c g g c c g g a g g t a g c g g t a g c g g t t c a g g t c t c c g g t t t t t c g a c t t g c t a c g g g t t c g a g g c c g g c c t c c a t c g c c a t c g c c a a g t c c

600 (in frame with 10xHis) SGSGSGSSELEKAMVALIDV SGSGSGSSELEKAMVALIDV t t c t g g t t c a g g t a g t g g t a g c a g c g a a c t g g a a a a a g c a a t g g t t g c a c t g a t t g a t g t a a g a c c a a g t c c a t c a c c a t c g t c g c t t g a c c t t t t t c g t t a c c a a c g t g a c t a a c t a c a

660 (in frame with 10xHis) FHQYSGREGDKHKLKKSELK FHQYSGREGDKHKLKKSELK g t t t c a t c a g t a t a g c g g t c g t g a a g g c g a t a a a c a c a a a c t g a a a a a a a g c g a g c t g a a c a a a g t a g t c a t a t c g c c a g c a c t t c c g c t a t t t g t g t t t g a c t t t t t t t c g c t c g a c t t

PflMIBclI* 720 (in frame with 10xHis) ELINNELSHFLEEIKEQEVV ELINNELSHFLEEIKEQEVV a g a g c t g a t c a a t a a c g a a c t g a g c c a t t t t c t g g a a g a g a t c a a a g a a c a a g a g g t g g t t c t c g a c t a g t t a t t g c t t g a c t c g g t a a a a g a c c t t c t c t a g t t t c t t g t t c t c c a c c a

BsmI 780 (in frame with 10xHis) DKVMETLDNDGDGECDFQEF DKVMETLDNDGDGECDFQEF g g a t a a a g t t a t g g a a a c c c t g g a t a a t g a t g g t g a t g g t g a a t g c g a t t t t c a a g a g t t c c t a t t t c a a t a c c t t t g g g a c c t a t t a c t a c c a c t a c c a c t t a c g c t a a a a g t t c t c a a

NgoMIVNaeIBstEIITsoI 840 (in frame with 10xHis) MAFVAMVTTACHEFFEHEAG MAFVAMVTTACHEFFEHEAG t a t g g c a t t t g t t g c a a t g g t t a c c a c c g c c t g t c a t g a a t t t t t t g a a c a c g a a g c c g g a t a c c g t a a a c a a c g t t a c c a a t g g t g g c g g a c a g t a c t t a a a a a a c t t g t g c t t c g g c c

900 1 5 10 15 20 KRRWKKNFIAVSAANRFKKI CBP KRRWKKNFIAVSAANRFKKI c a a g c g a c g a t g g a a a a a g a a t t t c a t a g c c g t c t c a g c a g c c a a c c g c t t t a a g a a a a t g t t c g c t g c t a c c t t t t t c t t a a a g t a t c g g c a g a g t c g t c g g t t g g c g a a a t t c t t t t a

BssHIIBsrGIAcc65IKpnIMluI 960 25 SSSGAL L* CBP SSSGALL* c t c a t c c t c c g g g g c a c t t c t g t a a t g t a c a g g t a c c a c g c g t g c g c g c t g a t c c g g c t g g a g t a g g a g g c c c c g t g a a g a c a t t a c a t g t c c a t g g t g c g c a c g c g c g a c t a g g c c g a c

BlpI 1020 T7 terminator G G C G A C T C G T T A T T G A T C G T7 Term c t a a c a a a g c c c g a a a g g a a g c t g a g t t g g c t g c t g c c a c c g c t g a g c a a t a a c t a g c a t g a t t g t t t c g g g c t t t c c t t c g a c t c a a c c g a c g a c g g t g g c g a c t c g t t a t t g a t c g t a

EcoO109IStyI 1080 T7 terminator a a c c c c t t g g g g c c t c t a a a c g g g t c t t g a g g g g t t t t t t g c t g a a a g g a g g a a c t a t a t t t g g g g a a c c c c g g a g a t t t g c c c a g a a c t c c c c a a a a a a c g a c t t t c c t c c t t g a t a t a

1140 AmpR promoter c g g g a t t a g c c c g c c t a a t g a g c g g g c t t t t t t t t a a t t c c c c t a t t t g t t t a t t t t t c t g c c c t a a t c g g g c g g a t t a c t c g c c c g a a a a a a a a t t a a g g g g a t a a a c a a a t a a a a a g a

SspI 1200 AmpR promoter a a a t a c a t t c a a a t a t g t a t c c g c t c a t g a g a c a a t a a c c c t g a t a a a t g c t t c a a t a a t t t t a t g t a a g t t t a t a c a t a g g c g a g t a c t c t g t t a t t g g g a c t a t t t a c g a a g t t a t t a

1260 AmpR promoter MSIQHFRVALIPFF a t t g a a a a a g g a a g a g t a t g a g t a t t c a a c a t t t c c g t g t c g c c c t t a t t c c c t t t t t t g t a a c t t t t t c c t t c t c a t a c t c a t a a g t t g t a a a g g c a c a g c g g g a a t a a g g g a a a a a a c

1320 AAFCLPVFAHPETLVKVKDA c g g c a t t t t g c c t t c c t g t t t t t g c t c a c c c a g a a a c g c t c g t g a a a g t a a a a g a c g c a g g c c g t a a a a c g g a a g g a c a a a a a c g a g t g g g t c t t t g c g a g c a c t t t c a t t t t c t g c g t c

MfeI 1380 EDQLGARVGYIELDLNSGKI a g g a c c a a t t g g g g g c a c g a g t g g g a t a c a t a g a a c t g g a c t t g a a t a g c g g t a a a a t c c t c c t g g t t a a c c c c c g t g c t c a c c c t a t g t a t c t t g a c c t g a a c t t a t c g c c a t t t t a g g

1440 LESFRPEERFPMMSTFKVLL t t g a g a g t t t t c g c c c t g a a g a g c g t t t t c c a a t g a t g a g c a c t t t c a a a g t t c t g c t a t a a c t c t c a a a a g c g g g a c t t c t c g c a a a a g g t t a c t a c t c g t g a a a g t t t c a a g a c g a t a

1500 CGAVLSRVDAGQEQLGRRIH * g t g g a g c a g t a t t a t c c c g t g t a g a t g c g g g g c a a g a g c a a c t c g g a c g a c g a a t a c a c t c a c c t c g t c a t a a t a g g g c a c a t c t a c g c c c c g t t c t c g t t g a g c c t g c t g c t t a t g t g a

1560 YSQNDLVEYSPVTEKHLTDG ECFSKTSYEGTVSFCRVSPI a t t c g c a g a a t g a c t t g g t t g a a t a c t c c c c a g t g a c a g a a a a g c a c c t t a c g g a c g g a a t a a g c g t c t t a c t g a a c c a a c t t a t g a g g g g t c a c t g t c t t t t c g t g g a a t g c c t g c c t t

BtsαIBtsI 1620 MTVRELCSAAITMSDNTAAN VTLSNHLAAMVILSLVAAFK t g a c g g t a a g a g a a t t a t g t a g t g c c g c c a t a a c g a t g a g t g a t a a c a c t g c g g c g a a c t a c t g c c a t t c t c t t a a t a c a t c a c g g c g g t a t t g c t a c t c a c t a t t g t g a c g c c g c t t g a

1680 LLLTTIGGPKELTAFLHNMG SRVVMPPGFSNVAKKCLIPS t a c t t c t g a c a a c c a t c g g t g g a c c g a a g g a a t t a a c c g c t t t t t t g c a c a a t a t g g g a g a t g a a g a c t g t t g g t a g c c a c c t g g c t t c c t t a a t t g g c g a a a a a a c g t g t t a t a c c c t c

1740 DHVTRLDRWEPELNEAIPND WTVRRSRQSGSSFSAMGFSS a c c a t g t a a c t c g c c t t g a c c g t t g g g a a c c a g a a c t g a a t g a a g c c a t a c c a a a c g a c g t g g t a c a t t g a g c g g a a c t g g c a a c c c t t g g t c t t g a c t t a c t t c g g t a t g g t t t g c t g c

1800 ERDTTMPAAMATTLRKLLTG RSVVIGAAIAVVNRLSNVPS a g c g a g a c a c c a c a a t g c c t g c g g c a a t g g c a a c a a c a t t a c g c a a a c t a t t a a c t g g c g t c g c t c t g t g g t g t t a c g g a c g c c g t t a c c g t t g t t g t a a t g c g t t t g a t a a t t g a c c g c

1860 ELLTLASRQQLIDWLEADKV SSVRAERCCNISQSSASLTA a a c t a c t t a c t c t g g c t t c a c g g c a a c a a t t a a t a g a c t g g c t t g a a g c g g a t a a a g t t g t t g a t g a a t g a g a c c g a a g t g c c g t t g t t a a t t a t c t g a c c g a a c t t c g c c t a t t t c a a c

1920 AGPLLRSALPAGWFIADKSG PGSSREASGAPQNIASLDPA c a g g a c c a c t a c t g c g t t c g g c a c t t c c t g c t g g c t g g t t t a t t g c t g a t a a a t c t g g g g g t c c t g g t g a t g a c g c a a g c c g t g a a g g a c g a c c g a c c a a a t a a c g a c t a t t t a g a c c c c

1980 AGERGSRGIIAALGPDGKPS PSRPERPIM c a g g a g a g c g t g g t t c a c g g g g t a t c a t t g c c g c a c t t g g a c c a g a t g g t a a g c c t t c c c g t c c t c t c g c a c c a a g t g c c c c a t a g t a a c g g c g t g a a c c t g g t c t a c c a t t c g g a a g g g

AhdI 2040 RIVVIYTTGSQATMDERNRQ g t a t c g t a g t t a t c t a c a c g a c g g g t a g t c a g g c a a c t a t g g a c g a a c g a a a t a g a c a g a c a t a g c a t c a a t a g a t g t g c t g c c c a t c a g t c c g t t g a t a c c t g c t t g c t t t a t c t g t c t

2100 fd terminator IAEIGASLIKHW* t t g c t g a a a t a g g g g c t t c a c t g a t t a a g c a t t g g t a a a c c g a t a c a a t t a a a g g c t c c t a a c g a c t t t a t c c c c g a a g t g a c t a a t t c g t a a c c a t t t g g c t a t g t t a a t t t c c g a g g a

RsrIIAgeI 2160 fd terminator ori t t t g g a g c c t t t t t t t t t g g a c g g a c c g g t a g a a a a g a t c a a a g g a t c t t c t t g a g a t c c a a a c c t c g g a a a a a a a a a c c t g c c t g g c c a t c t t t t c t a g t t t c c t a g a a g a a c t c t a g g

2220 ori t t t t t t t c t g c g c g t a a t c t g c t g c t t g c a a a c a a a a a a a c c a c c g c t a c c a g c g g t g g t a a a a a a a g a c g c g c a t t a g a c g a c g a a c g t t t g t t t t t t t g g t g g c g a t g g t c g c c a c c a

2280 ori t t g t t t g c c g g a t c a a g a g c t a c c a a c t c t t t t t c c g a a g g t a a c t g g c t t c a g c a g a g c a a c a a a c g g c c t a g t t c t c g a t g g t t g a g a a a a a g g c t t c c a t t g a c c g a a g t c g t c t c g

2340 ori g c a g a t a c c a a a t a c t g t c c t t c t a g t g t a g c c g t a g t t a g g c c a c c a c t t c a a g a a c t c c g t c t a t g g t t t a t g a c a g g a a g a t c a c a t c g g c a t c a a t c c g g t g g t g a a g t t c t t g a g

2400 ori t g t a g c a c c g c c t a c a t a c c t c g c t c t g c t a a t c c t g t t a c c a g t g g c t g c t g c c a g t g g a c a t c g t g g c g g a t g t a t g g a g c g a g a c g a t t a g g a c a a t g g t c a c c g a c g a c g g t c a c c

2460 ori c g a t a a g t c g t g t c t t a c c g g g t t g g a c t c a a g a c g a t a g t t a c c g g a t a a g g c g c a g c g g c t a t t c a g c a c a g a a t g g c c c a a c c t g a g t t c t g c t a t c a a t g g c c t a t t c c g c g t c g c

BseYIPspFI 2520 ori g t c g g g c t g a a c g g g g g g t t c g t g c a c a c a g c c c a g c t t g g a g c g a a c g a c c t a c a c c g a c a g c c c g a c t t g c c c c c c a a g c a c g t g t g t c g g g t c g a a c c t c g c t t g c t g g a t g t g g c t

2580 ori a c t g a g a t a c c t a c a g c g t g a g c t a t g a g a a a g c g c c a c g c t t c c c g a a g g g a g a a a g g c t g a c t c t a t g g a t g t c g c a c t c g a t a c t c t t t c g c g g t g c g a a g g g c t t c c c t c t t t c c g

2640 ori g g a c a g g t a t c c g g t a a g c g g c a g g g t c g g a a c a g g a g a g c g c a c g a g g g a g c t t c c a g g c c t g t c c a t a g g c c a t t c g c c g t c c c a g c c t t g t c c t c t c g c g t g c t c c c t c g a a g g t c c

2700 ori G G G A A A C G C C T G G T A T C T T T pBR322ori-F g g g a a a c g c c t g g t a t c t t t a t a g t c c t g t c g g g t t t c g c c a c c t c t g a c t t g a g c g t c g c c c t t t g c g g a c c a t a g a a a t a t c a g g a c a g c c c a a a g c g g t g g a g a c t g a a c t c g c a g c

2760 ori a t t t t t g t g a t g c t c g t c a g g g g g g c g g a g c c t a t g g a a a a a c g c c a g c a a c g c g g c c t t t a a a a a c a c t a c g a g c a g t c c c c c c g c c t c g g a t a c c t t t t t g c g g t c g t t g c g c c g g a a

PciI 2820 t t t a c g g t t c c t g g c c t t t t g c t g g c c t t t t g c t c a c a t g t t c t t t c c t g c g t t a t c c c c a a a t g c c a a g g a c c g g a a a a c g a c c g g a a a a c g a g t g t a c a a g a a a g g a c g c a a t a g g g g

2880 t g a t t c t g t g g a t a a c c g t a t t a c c g c c t t t g a g t g a g c t g a t a c c g c t c g c c g c a g c c g a c t a a g a c a c c t a t t g g c a t a a t g g c g g a a a c t c a c t c g a c t a t g g c g a g c g g c g t c g g c

2940 bom A G C G A G T C A G T G A G C G A G L4440 a a c g a c c g a g c g c a g c g a g t c a g t g a g c g a g g a a g c g g a a g a g c g c c t g a t g c g g t a t t t t t g c t g g c t c g c g t c g c t c a g t c a c t c g c t c c t t c g c c t t c t c g c g g a c t a c g c c a t a a a

3000 bom A T G T T A G A C G pRS-marker t c t c c t t a c g c a t c t g t g c g g t a t t t c a c a c c g c a a t g g t g c a c t c t c a g t a c a a t c t g c a g a g g a a t g c g t a g a c a c g c c a t a a a g t g t g g c g t t a c c a c g t g a g a g t c a t g t t a g a c g

Tth111IPflFIBsaAIAccIBstZ17I 3060 bom A G A C T A C G G C pRS-marker t c t g a t g c c g c a t a g t t a a g c c a g t a t a c a c t c c g c t a t c g c t a c g t g a c t g g g t c a t g g a g a c t a c g g c g t a t c a a t t c g g t c a t a t g t g a g g c g a t a g c g a t g c a c t g a c c c a g t a c c

3120 bom c t g c g c c c c g a c a c c c g c c a a c a c c c g c t g a c g c g c c c t g a c g g g c t t g t c t g c t c c c g g g a c g c g g g g c t g t g g g c g g t t g t g g g c g a c t g c g c g g g a c t g c c c g a a c a g a c g a g g g c c

PfoI 3180 60 *LNEG rop C C G G G A G C T G C A T G T G T C A G A G G pGEX 3' c a t c c g c t t a c a g a c a a g c t g t g a c c g t c t c c g g g a g c t g c a t g t g t c a g a g g t t t t c a c g t a g g c g a a t g t c t g t t c g a c a c t g g c a g a g g c c c t c g a c g t a c a c a g t c t c c a a a a g t g

PvuII 3240 55 50 45 40 DDGFRALCSRYLEDAHDHLS rop c g t c a t c a c c g a a a c g c g c g a g g c a g c t g c g g t a a a g c t c a t c a g c g t g g t c g t g a a g c g g c a g t a g t g g c t t t g c g c g c t c c g t c g a c g c c a t t t c g a g t a g t c g c a c c a g c a c t t c g c

BpmI 3300 35 30 25 20 ECIDAQEDADLENLKELLTL rop a t t c a c a g a t g t c t g c c t g t t c a t c c g c g t c c a g c t c g t t g a g t t t c t c c a g a a g c g t t a t a a g t g t c t a c a g a c g g a c a a g t a g g c g c a g g t c g a g c a a c t c a a a g a g g t c t t c g c a a t

3360 15 10 5 1 TQSRIFRAMNLATKEQKTM rop a t g t c t g g c t t c t g a t a a a g c g g g c c a t g t t a a g g g c g g t t t t t t c c t g t t t g g t c a c t g t a c a g a c c g a a g a c t a t t t c g c c c g g t a c a a t t c c c g c c a a a a a a g g a c a a a c c a g t g a c

3420 a t g c c t c c g t g t a a g g g g g a t t t c t g t t c a t g g g g t a a t g a t a c c g a t g a a a c g a g a g a g t a c g g a g g c a c a t t c c c c c t a a a g a c a a g t a c c c c a t t a c t a t g g c t a c t t t g c t c t c t c

AclI 3480 g a t g c t c a c g a t a c g g g t t a c t g a t g a t g a a c a t g c c c g g t t a c t g g a a c g t t g t g a g g g c t a c g a g t g c t a t g c c c a a t g a c t a c t a c t t g t a c g g g c c a a t g a c c t t g c a a c a c t c c c

3540 t a a a c a a c t g g c g g t a t g g a t g c g g c g g g a c c a g a g a a a a a t c a c t c a g g g t c a a t g c c a a t t t g t t g a c c g c c a t a c c t a c g c c g c c c t g g t c t c t t t t t a g t g a g t c c c a g t t a c g g t

AfeI 3568 g c g c t t c g t t a a t a c a g a t g t a g g t g t t c g c g a a g c a a t t a t g t c t a c a t c c a c a a

Restriction Enzymes

Instructions: By default, all cutters are shown. Filter on number of cut sites or search by enzyme name.

Filter

Features

Primers

BLAST

BLAST (Basic Local Alignment Search Tool) finds regions of similarity between biological sequences. Click on the buttons below to submit a BLAST search to NCBI. The results will appear in a new window. See your recent BLAST results on NCBI's website.

  • Nucleotide-Nucleotide BLAST (BLASTN)

  • Translated Nucleotide-Protein BLAST (BLASTX)

  • Sequence alignment using BLAST (BLAST2)

Sequence Analyzer Guide

Map

Displays a graphical map based on nucleotide sequence data labeled with restriction enzymes, plasmid features, ORFs (theoretical open reading frames) and primers. Hovering over data labels will display additional information (e.g. cut site)

To select a portion of sequence, click one location on the plasmid and then a second location to display the sequence between the two locations.

Sequence

Displays both strands of base paired nucleotide sequences with annotated enzymes, plasmid features, ORFs (theoretical open reading frames) and primers. Hovering over data labels will display additional information (e.g. cut site).

To select a portion of sequence, click one location on the sequence and then a second location to display the sequence between the two locations.

Enzymes

List of restriction enzymes that can cut a given nucleotide sequence. Table lists enzyme name and the sequence location of the cut.

Features

List of common features detected in a given nucleotide sequence. Table lists feature name, location, size, color used to indicate its position on the map, and direction (if relevant).

Primers

List of commonly used primers detected in a given nucleotide sequence. Table lists primer name, sequence, length, binding site location, and direction.

BLAST

Use Basic Local Alignment Search Tool (BLAST) via the NCBI website to determine similarity between a given sequence and nucleotide (BLASTN) or protein (BLASTX) sequence databases. Additionally, align a custom nucleotide sequence against a given sequence using BLAST2.

File Downloads

GenBank

File contains the nucleotide sequence and annotated features in GenBank flat file format. Open the file with a text editor or plasmid mapping software to view the sequence.

SnapGene

File contains the nucleotide sequence and enhanced annotations from SnapGene Server. Open the file with SnapGene software or the free Viewer to view the plasmid map, sequence, and perform additional sequence analysis.