A genome-scale screen for synthetic drivers of T cell proliferation. | Legut M, Gajic Z, Guarino M, Daniloski Z, Rahman JA, Xue X, Lu C, Lu L, Mimitou EP, Hao S, Davoli T, Diefenbach C, Smibert P, Sanjana NE | Nature. 2022 Mar;603(7902):728-735. doi: 10.1038/s41586-022-04494-7. Epub 2022 Mar 16. |
Chemically modified guide RNAs enhance CRISPR-Cas13 knockdown in human cells. | Mendez-Mancilla A, Wessels HH, Legut M, Kadina A, Mabuchi M, Walker J, Robb GB, Holden K, Sanjana NE | Cell Chem Biol. 2022 Feb 17;29(2):321-327.e4. doi: 10.1016/j.chembiol.2021.07.011. Epub 2021 Aug 2. |
Discovery of target genes and pathways at GWAS loci by pooled single-cell CRISPR screens. | Morris JA, Caragine C, Daniloski Z, Domingo J, Barry T, Lu L, Davis K, Ziosi M, Glinos DA, Hao S, Mimitou EP, Smibert P, Roeder K, Katsevich E, Lappalainen T, Sanjana NE | Science. 2023 May 19;380(6646):eadh7699. doi: 10.1126/science.adh7699. Epub 2023 May 19. |
Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq. | Wessels HH, Mendez-Mancilla A, Hao Y, Papalexi E, Mauck WM 3rd, Lu L, Morris JA, Mimitou EP, Smibert P, Sanjana NE, Satija R | Nat Methods. 2023 Jan;20(1):86-94. doi: 10.1038/s41592-022-01705-x. Epub 2022 Dec 22. |
High-Throughput Screens of PAM-Flexible Cas9 Variants for Gene Knockout and Transcriptional Modulation. | Legut M, Daniloski Z, Xue X, McKenzie D, Guo X, Wessels HH, Sanjana NE | Cell Rep. 2020 Mar 3;30(9):2859-2868.e5. doi: 10.1016/j.celrep.2020.02.010. |
Identification of Required Host Factors for SARS-CoV-2 Infection in Human Cells. | Daniloski Z, Jordan TX, Wessels HH, Hoagland DA, Kasela S, Legut M, Maniatis S, Mimitou EP, Lu L, Geller E, Danziger O, Rosenberg BR, Phatnani H, Smibert P, Lappalainen T, tenOever BR, Sanjana NE | Cell. 2020 Oct 24. pii: S0092-8674(20)31394-5. doi: 10.1016/j.cell.2020.10.030. |
Low copy CRISPR-Cas13d mitigates collateral RNA cleavage. | Hart SK, Wessels HH, Mendez-Mancilla A, Muller S, Drabavicius G, Choi O, Sanjana NE | bioRxiv [Preprint]. 2024 May 14:2024.05.13.594039. doi: 10.1101/2024.05.13.594039. |
Massively parallel Cas13 screens reveal principles for guide RNA design. | Wessels HH, Mendez-Mancilla A, Guo X, Legut M, Daniloski Z, Sanjana NE | Nat Biotechnol. 2020 Jun;38(6):722-727. doi: 10.1038/s41587-020-0456-9. Epub 2020 Mar 16. |
Paired CRISPR screens to map gene regulation in cis and trans | Xue X, Gajic ZZ, Caragine CM, Legut M, Walker C, Kim JYS, Wang X, Yan RE, Wessels H-H, Lu C, Bapodra N, Gürsoy G, Sanjana NE | bioRxiv 2024.11.27.625752 |
The Spike D614G mutation increases SARS-CoV-2 infection of multiple human cell types. | Daniloski Z, Jordan TX, Ilmain JK, Guo X, Bhabha G, tenOever BR, Sanjana NE | Elife. 2021 Feb 11;10. pii: 65365. doi: 10.7554/eLife.65365. |