Xiaokun Shu Lab Materials

The Xiaokun Shu Lab has deposited materials at Addgene for distribution to the research community. Addgene is a nonprofit plasmid repository dedicated to improving life science research.

Learn more about research in the Xiaokun Shu Lab.

If this is your lab: Add a depositor badge to your website.

• Plasmids
• Articles

Showing 1 to 10 of 16 entries

Show 102550100All entries

Search table:

• Previous
• 1
• 2
• Next

Title	Authors	Publication
A naturally monomeric infrared fluorescent protein for protein labeling in vivo.	Yu D, Baird MA, Allen JR, Howe ES, Klassen MP, Reade A, Makhijani K, Song Y, Liu S, Murthy Z, Zhang SQ, Weiner OD, Kornberg TB, Jan YN, Davidson MW, Shu X	Nat Methods. 2015 Aug;12(8):763-765. doi: 10.1038/nmeth.3447. Epub 2015 Jun 22.
A rapid fluorogenic GPCR-beta-arrestin interaction assay.	Zhang Q, Zheng YW, Coughlin SR, Shu X	Protein Sci. 2018 Apr;27(4):874-879. doi: 10.1002/pro.3385. Epub 2018 Feb 23.
An improved monomeric infrared fluorescent protein for neuronal and tumour brain imaging.	Yu D, Gustafson WC, Han C, Lafaye C, Noirclerc-Savoye M, Ge WP, Thayer DA, Huang H, Kornberg TB, Royant A, Jan LY, Jan YN, Weiss WA, Shu X	Nat Commun. 2014 May 15;5:3626. doi: 10.1038/ncomms4626.
ATM-SPARK: A GFP phase separation-based activity reporter of ATM.	Li X, Chung CI, Yang J, Chaudhuri S, Munster PN, Shu X	Sci Adv. 2023 Mar;9(9):eade3760. doi: 10.1126/sciadv.ade3760. Epub 2023 Mar 1.
Chemogenetic Minitool for Dissecting the Roles of Protein Phase Separation.	Chung CI, Yang J, Shu X	ACS Cent Sci. 2023 Jul 7;9(7):1466-1479. doi: 10.1021/acscentsci.3c00251. eCollection 2023 Jul 26.
Designing a green fluorogenic protease reporter by flipping a beta strand of GFP for imaging apoptosis in animals.	Zhang Q, Schepis A, Huang H, Yang J, Ma W, Torra J, Zhang SQ, Yang L, Wu H, Nonell S, Dong Z, Kornberg TB, Coughlin SR, Shu X	J Am Chem Soc. 2019 Mar 1. doi: 10.1021/jacs.8b13042.
Ethacridine inhibits SARS-CoV-2 by inactivating viral particles.	Li X, Lidsky P, Xiao Y, Wu CT, Garcia-Knight M, Yang J, Nakayama T, Nayak JV, Jackson PK, Andino R, Shu X	PLoS Pathog. 2021 Sep 3;17(9):e1009898. doi: 10.1371/journal.ppat.1009898.
FlipGFP-based activity reporter of SARS-CoV-2 main protease Mpro	(unpublished)
Fluorogenic reporter enables identification of compounds that inhibit SARS-CoV-2.	Yang J, Xiao Y, Lidsky PV, Wu CT, Bonser LR, Peng S, Garcia-Knight MA, Tassetto M, Chung CI, Li X, Nakayama T, Lee IT, Nayak JV, Ghias K, Hargett KL, Shoichet BK, Erle DJ, Jackson PK, Andino R, Shu X	Nat Microbiol. 2023 Jan;8(1):121-134. doi: 10.1038/s41564-022-01288-5. Epub 2023 Jan 5.
Phase separation of YAP-MAML2 differentially regulates the transcriptome.	Chung CI, Yang J, Yang X, Liu H, Ma Z, Szulzewsky F, Holland EC, Shen Y, Shu X	Proc Natl Acad Sci U S A. 2024 Feb 13;121(7):e2310430121. doi: 10.1073/pnas.2310430121. Epub 2024 Feb 5.

Showing 1 to 10 of 68 entries

Show 102550100All entries

Search table:

• Previous
• 1
• 2
• 3
• 4
• 5
• 6
• 7
• Next

	ID	Plasmid	Gene/Insert	Vector Type	Publication
100.357.613779.54620	54620	mIFP-N1		Mammalian Expression	A naturally monomeric infrared fluorescent protein for protein labeling in vivo. Nat Methods. 2015 Aug;12(8):763-765. doi: 10.1038/nmeth.3447. Epub 2015 Jun 22.
100.157.860342.124428	124428	PCDNA3-FlipGFP(Casp3 cleavage seq) T2A mCherry	FlipGFP(Casp3 cleavage seq) T2A mCherry	Mammalian Expression	Designing a green fluorogenic protease reporter by flipping a beta strand of GFP for imaging apoptosis in animals. J Am Chem Soc. 2019 Mar 1. doi: 10.1021/jacs.8b13042.
100.46.821152.64278	64278	pcDNA3.1 iCasper T2A HO1	Infrared fluorescent executioner caspase reporter (iCasper) T2A heme oxygenase-1: (HMOX1 Synthetic)	Mammalian Expression	Rationally designed fluorogenic protease reporter visualizes spatiotemporal dynamics of apoptosis in vivo. Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3338-43. doi: 10.1073/pnas.1502857112. Epub 2015 Mar 2.
100.17.604415.124429	124429	PCDNA3-FlipGFP(TEV cleavage seq) T2A mCherry	FlipGFP(TEV cleavage seq) T2A mCherry	Mammalian Expression	Designing a green fluorogenic protease reporter by flipping a beta strand of GFP for imaging apoptosis in animals. J Am Chem Soc. 2019 Mar 1. doi: 10.1021/jacs.8b13042.
100.13.352833.64276	64276	pcDNA3.1 TEV (full-length)	Tobacco etch virus (TEV) protease	Mammalian Expression	Rationally designed fluorogenic protease reporter visualizes spatiotemporal dynamics of apoptosis in vivo. Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3338-43. doi: 10.1073/pnas.1502857112. Epub 2015 Mar 2.
100.9.122906.81241	81241	ZipGFP-Casp3	ZipGFP with caspase cleavage sequence T2A mCherry	Mammalian Expression	Rational Design of a GFP-Based Fluorogenic Caspase Reporter for Imaging Apoptosis In Vivo. Cell Chem Biol. 2016 Jul 21;23(7):875-82. doi: 10.1016/j.chembiol.2016.06.007.
100.7.342061.124436	124436	pcDNA3-FlipCherry-T2A-GFP	FlipCherry-T2A-GFP	Mammalian Expression	Designing a green fluorogenic protease reporter by flipping a beta strand of GFP for imaging apoptosis in animals. J Am Chem Soc. 2019 Mar 1. doi: 10.1021/jacs.8b13042.
100.5.900006.106921	106921	pcDNA3-ERK-SPARK	ERK-SPARK	Mammalian Expression	Visualizing Dynamics of Cell Signaling In Vivo with a Phase Separation-Based Kinase Reporter. Mol Cell. 2018 Jan 3. pii: S1097-2765(17)30936-X. doi: 10.1016/j.molcel.2017.12.008.
50.7.088223.106920	106920	pcDNA3-PKA-SPARK	PKA-SPARK	Mammalian Expression	Visualizing Dynamics of Cell Signaling In Vivo with a Phase Separation-Based Kinase Reporter. Mol Cell. 2018 Jan 3. pii: S1097-2765(17)30936-X. doi: 10.1016/j.molcel.2017.12.008.
50.4.589298.87410	87410	pcDNA3.1_miniSOG2 T2A H2B-EGFP	mini singlet oxygen generator 2	Mammalian Expression	Precision Optogenetic Tool for Selective Single- and Multiple-Cell Ablation in a Live Animal Model System. Cell Chem Biol. 2017 Jan 19;24(1):110-119. doi: 10.1016/j.chembiol.2016.12.010. Epub 2017 Jan 5.