A Comprehensive, Flexible Collection of SARS-CoV-2 Coding Regions.
Kim DK, Knapp JJ, Kuang D, Chawla A, Cassonnet P, Lee H, Sheykhkarimli D, Samavarchi-Tehrani P, Abdouni H, Rayhan A, Li R, Pogoutse O, Coyaud E, van der Werf S, Demeret C, Gingras AC, Taipale M, Raught B, Jacob Y, Roth FP
G3 (Bethesda). 2020 Aug 6. pii: g3.120.401554. doi: 10.1534/g3.120.401554.
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Article
Plasmids from Article
ID | Plasmid | Purpose |
---|---|---|
141255 | pDONR207 SARS-CoV-2 NSP1 | Gateway-compatible Entry vector, with insert of NSP1 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141256 | pDONR223 SARS-CoV-2 NSP2 | Gateway-compatible Entry vector, with insert of NSP2 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141257 | pDONR207 SARS-CoV-2 NSP3 | Gateway-compatible Entry vector, with insert of NSP3 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141258 | pDONR223 SARS-CoV-2 NSP4 | Gateway-compatible Entry vector, with insert of NSP4 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141259 | pDONR223 SARS-CoV-2 NSP5 | Gateway-compatible Entry vector, with insert of NSP5 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141260 | pDONR223 SARS-CoV-2 NSP6 | Gateway-compatible Entry vector, with insert of NSP6 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141261 | pDONR223 SARS-CoV-2 NSP7 | Gateway-compatible Entry vector, with insert of NSP7 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141262 | pDONR223 SARS-CoV-2 NSP8 | Gateway-compatible Entry vector, with insert of NSP8 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141263 | pDONR223 SARS-CoV-2 NSP9 | Gateway-compatible Entry vector, with insert of NSP9 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141264 | pDONR223 SARS-CoV-2 NSP10 | Gateway-compatible Entry vector, with insert of NSP10 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141265 | pDONR223 SARS-CoV-2 NSP12 | Gateway-compatible Entry vector, with insert of NSP12 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141266 | pDONR223 SARS-CoV-2 NSP13 | Gateway-compatible Entry vector, with insert of NSP13 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141267 | pDONR223 SARS-CoV-2 NSP14 | Gateway-compatible Entry vector, with insert of NSP14 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141268 | pDONR223 SARS-CoV-2 NSP15 | Gateway-compatible Entry vector, with insert of NSP15 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141269 | pDONR223 SARS-CoV-2 NSP16 | Gateway-compatible Entry vector, with insert of NSP16 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141271 | pDONR207 SARS-CoV-2 ORF3A | Gateway-compatible Entry vector, with insert of ORF3A gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141272 | pDONR223 SARS-CoV-2 ORF3B | Gateway-compatible Entry vector, with insert of ORF3B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141273 | pDONR207 SARS-CoV-2 E | Gateway-compatible Entry vector, with insert of the envelope (E) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141274 | pDONR207 SARS-CoV-2 M | Gateway-compatible Entry vector, with insert of the membrane (M) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141275 | pDONR223 SARS-CoV-2 ORF6 | Gateway-compatible Entry vector, with insert of ORF6 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141276 | pDONR207 SARS-CoV-2 ORF7A | Gateway-compatible Entry vector, with insert of ORF7A gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141277 | pDONR223 SARS-CoV-2 ORF7B | Gateway-compatible Entry vector, with insert of ORF7B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141278 | pDONR223 SARS-CoV-2 ORF8 | Gateway-compatible Entry vector, with insert of ORF8 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
141280 | pDONR223 SARS-CoV-2 ORF9B | Gateway-compatible Entry vector, with insert of ORF9B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
149304 | pDONR207 SARS-CoV-2 NSP1_nostop | Gateway-compatible Entry vector, with insert of NSP1 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149305 | pDONR223 SARS-CoV-2 NSP2_nostop | Gateway-compatible Entry vector, with insert of NSP2 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149306 | pDONR207 SARS-CoV-2 NSP3_nostop | Gateway-compatible Entry vector, with insert of NSP3 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149307 | pDONR223 SARS-CoV-2 NSP4_nostop | Gateway-compatible Entry vector, with insert of NSP4 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149308 | pDONR223 SARS-CoV-2 NSP5_nostop | Gateway-compatible Entry vector, with insert of NSP5 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149309 | pDONR223 SARS-CoV-2 NSP6_nostop | Gateway-compatible Entry vector, with insert of NSP6 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149310 | pDONR223 SARS-CoV-2 NSP7_nostop | Gateway-compatible Entry vector, with insert of NSP7 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149311 | pDONR223 SARS-CoV-2 NSP8_nostop | Gateway-compatible Entry vector, with insert of NSP8 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149312 | pDONR223 SARS-CoV-2 NSP9_nostop | Gateway-compatible Entry vector, with insert of NSP9 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149313 | pDONR223 SARS-CoV-2 NSP10_nostop | Gateway-compatible Entry vector, with insert of NSP10 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149314 | pDONR223 SARS-CoV-2 NSP12_nostop | Gateway-compatible Entry vector, with insert of NSP12 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149315 | pDONR223 SARS-CoV-2 NSP13_nostop | Gateway-compatible Entry vector, with insert of NSP13 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149316 | pDONR223 SARS-CoV-2 NSP14_nostop | Gateway-compatible Entry vector, with insert of NSP14 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149317 | pDONR223 SARS-CoV-2 NSP15_nostop | Gateway-compatible Entry vector, with insert of NSP15 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149318 | pDONR223 SARS-CoV-2 NSP16_nostop | Gateway-compatible Entry vector, with insert of NSP16 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149319 | pDONR207 SARS-CoV-2 ORF3A_nostop | Gateway-compatible Entry vector, with insert of ORF3A gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149320 | pDONR223 SARS-CoV-2 ORF3B_nostop | Gateway-compatible Entry vector, with insert of ORF3B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149321 | pDONR207 SARS-CoV-2 E_nostop | Gateway-compatible Entry vector, with insert of the envelope (E) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149322 | pDONR207 SARS-CoV-2 M_nostop | Gateway-compatible Entry vector, with insert of the membrane (M) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149323 | pDONR223 SARS-CoV-2 ORF6_nostop | Gateway-compatible Entry vector, with insert of ORF6 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149324 | pDONR207 SARS-CoV-2 ORF7A_nostop | Gateway-compatible Entry vector, with insert of ORF7A gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149325 | pDONR223 SARS-CoV-2 ORF7B_nostop | Gateway-compatible Entry vector, with insert of ORF7B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149326 | pDONR223 SARS-CoV-2 ORF8_nostop | Gateway-compatible Entry vector, with insert of ORF8 gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149327 | pDONR223 SARS-CoV-2 ORF9B_nostop | Gateway-compatible Entry vector, with insert of ORF9B gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1. Does not contain stop codon. |
149328 | pDONR223 SARS-CoV-2 ORF9Bwu_nostop | Gateway-compatible Entry vector, with insert of ORF9Bwu gene's CDS from SARS-CoV-2 genome definition in Wu et al, Nature 2020. Does not contain stop codon. |
149329 | pDONR223 SARS-CoV-2 S | Gateway-compatible Entry vector, with insert of the spike (S) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
149330 | pDONR223 SARS-CoV-2 N | Gateway-compatible Entry vector, with insert of the nucleocapsid (N) gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
149331 | pDONR223 SARS-CoV-2 ORF9Bwu | Gateway-compatible Entry vector, with insert of ORF9Bwu gene's CDS from SARS-CoV-2 genome definition in Wu et al, Nature 2020 |
149332 | pDONR223 SARS-CoV-2 ORF10wu | Gateway-compatible Entry vector, with insert of ORF10wu gene's CDS from SARS-CoV-2 genome definition in Wu et al, Nature 2020 |
152986 | pDONR223 SARS-CoV-2 ORF10wu_nostop | Gateway-compatible Entry vector, with insert of ORF10wu gene's CDS from SARS-CoV-2 genome definition in Wu et al, Nature 2020 |
152987 | pDONR223 SARS-CoV-2 N_nostop | Gateway-compatible Entry vector, with insert of N gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
152988 | pDONR223 SARS-CoV-2 S_nostop | Gateway-compatible Entry vector, with insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153173 | pDONR221 SARS-CoV-2 S-frag1_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153174 | pDONR221 SARS-CoV-2 S-frag2_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153175 | pDONR221 SARS-CoV-2 S-frag3_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153176 | pDONR221 SARS-CoV-2 S-frag4_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153177 | pDONR221 SARS-CoV-2 S-frag5_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153184 | pDONR221 SARS-CoV-2 S-frag6_nostop | Gateway-compatible Entry vector, with a fragmented insert of S gene's CDS from SARS-CoV-2 isolate Wuhan-Hu-1 |
153952 | pDONR223 SARS-CoV-2 S 24nt-del | Gateway-compatible Entry vector, with insert of S CDS bearing a 24nt deletion from SARS-CoV-2 genomic analysis in Davidson et al. 2020 |
153953 | pDONR223 SARS-CoV-2 S 24nt-del_nostop | Gateway-compatible Entry vector, with insert of S CDS bearing a 24nt deletion from SARS-CoV-2 genomic analysis in Davidson et al. 2020 |
153954 | pDONR207 SARS-CoV-2 E 27nt-del | Gateway-compatible Entry vector, with insert of E CDS bearing a 27nt deletion from SARS-CoV-2 genomic analysis in Davidson et al. 2020 |
153955 | pDONR207 SARS-CoV-2 E 27nt-del_nostop | Gateway-compatible Entry vector, with insert of E CDS bearing a 27nt deletion from SARS-CoV-2 genomic analysis in Davidson et al. 2020 |
153956 | pDONR223 SARS-CoV-2 ORF7B C-trunc_nostop | Gateway-compatible Entry vector, with insert of truncated ORF7B CDS from SARS-CoV-2 genomic analysis in Kim et al. 2020 |
153957 | pDONR223 SARS-CoV-2 ORF7B C-trunc | Gateway-compatible Entry vector, with insert of truncated ORF7B CDS from SARS-CoV-2 genomic analysis in Kim et al. 2020 |
154027 | pDONR207 SARS-CoV-2 NSP3 Cys857Ala | Gateway-compatible Entry vector |
154028 | pDONR223 SARS-CoV-2 NSP5 Cys146Ala | Gateway-compatible Entry vector |
154029 | pDONR207 SARS-CoV-2 NSP3 Cys857Ala_nostop | Gateway-compatible Entry vector |
154030 | pDONR223 SARS-CoV-2 NSP5 Cys146Ala_nostop | Gateway-compatible Entry vector |
154400 | pDONR223 SARS-CoV2 TEV-NSP1 | Gateway-compatible Entry vector |
154401 | pDONR223 SARS-CoV2 TEV-NSP2 | Gateway-compatible Entry vector |
154402 | pDONR207 SARS-CoV2 TEV-NSP3 | Gateway-compatible Entry vector |
154403 | pDONR223 SARS-CoV2 TEV-NSP4 | Gateway-compatible Entry vector |
154404 | pDONR223 SARS-CoV2 TEV-NSP5 | Gateway-compatible Entry vector |
154405 | pDONR223 SARS-CoV2 TEV-NSP6 | Gateway-compatible Entry vector |
154406 | pDONR223 SARS-CoV2 TEV-NSP7 | Gateway-compatible Entry vector |
154407 | pDONR223 SARS-CoV2 TEV-NSP8 | Gateway-compatible Entry vector |
154408 | pDONR223 SARS-CoV2 TEV-NSP9 | Gateway-compatible Entry vector |
154409 | pDONR223 SARS-CoV2 TEV-NSP10 | Gateway-compatible Entry vector |
154410 | pDONR223 SARS-CoV2 TEV-NSP12 | Gateway-compatible Entry vector |
154411 | pDONR223 SARS-CoV2 TEV-NSP13 | Gateway-compatible Entry vector |
154412 | pDONR223 SARS-CoV2 TEV-NSP14 | Gateway-compatible Entry vector |
154413 | pDONR223 SARS-CoV2 TEV-NSP15 | Gateway-compatible Entry vector |
154414 | pDONR223 SARS-CoV2 TEV-NSP16 | Gateway-compatible Entry vector |
154415 | pDONR223 SARS-CoV2 TEV-S | Gateway-compatible Entry vector |
154416 | pDONR223 SARS-CoV2 TEV-ORF3A | Gateway-compatible Entry vector |
154417 | pDONR223 SARS-CoV2 TEV-ORF3B | Gateway-compatible Entry vector |
154418 | pDONR223 SARS-CoV2 TEV-E | Gateway-compatible Entry vector |
154419 | pDONR223 SARS-CoV2 TEV-M | Gateway-compatible Entry vector |
154420 | pDONR223 SARS-CoV2 TEV-ORF6 | Gateway-compatible Entry vector |
154421 | pDONR223 SARS-CoV2 TEV-ORF7A | Gateway-compatible Entry vector |
154422 | pDONR223 SARS-CoV2 TEV-ORF7B | Gateway-compatible Entry vector |
154423 | pDONR223 SARS-CoV2 TEV-ORF8 | Gateway-compatible Entry vector |
154424 | pDONR223 SARS-CoV2 TEV-N | Gateway-compatible Entry vector |
154425 | pDONR223 SARS-CoV2 TEV-ORF9B | Gateway-compatible Entry vector |