| A comprehensive all-in-one CRISPR toolbox for large-scale screens in plants. | Cheng Y, Li G, Qi A, Mandlik R, Pan C, Wang D, Ge S, Qi Y | Plant Cell. 2025 Apr 9:koaf081. doi: 10.1093/plcell/koaf081. |
| A CRISPR-Cpf1 system for efficient genome editing and transcriptional repression in plants. | Tang X, Lowder LG, Zhang T, Malzahn AA, Zheng X, Voytas DF, Zhong Z, Chen Y, Ren Q, Li Q, Kirkland ER, Zhang Y, Qi Y | Nat Plants. 2017 Feb 17;3:17018. doi: 10.1038/nplants.2017.18. |
| A CRISPR/Cas9 toolbox for multiplexed plant genome editing and transcriptional regulation. | Lowder LG, Paul JW, Baltes NJ, Voytas DF, Zhang Y, Zhang D, Tang X, Zheng X, Hsieh TF, Qi Y | Plant Physiol. 2015 Aug 21. pii: pp.00636.2015. |
| Activities and specificities of CRISPR/Cas9 and Cas12a nucleases for targeted mutagenesis in maize. | Lee K, Zhang Y, Kleinstiver BP, Guo JA, Aryee MJ, Miller J, Malzahn A, Zarecor S, Lawrence-Dill CJ, Joung JK, Qi Y, Wang K | Plant Biotechnol J. 2018 Jul 4. doi: 10.1111/pbi.12982. |
| Boosting genome editing efficiency in human cells and plants with novel LbCas12a variants. | Zhang L, Li G, Zhang Y, Cheng Y, Roberts N, Glenn SE, DeZwaan-McCabe D, Rube HT, Manthey J, Coleman G, Vakulskas CA, Qi Y | Genome Biol. 2023 Apr 30;24(1):102. doi: 10.1186/s13059-023-02929-6. |
| Boosting plant genome editing with a versatile CRISPR-Combo system. | Pan C, Li G, Malzahn AA, Cheng Y, Leyson B, Sretenovic S, Gurel F, Coleman GD, Qi Y | Nat Plants. 2022 May;8(5):513-525. doi: 10.1038/s41477-022-01151-9. Epub 2022 May 20. |
| Broad range plastid genome editing with monomeric TALE-linked cytosine and dual base editors. | Wang X, Fang T, Lu J, Tripathi L, Qi Y | Plant Biotechnol J. 2024 May 6. doi: 10.1111/pbi.14358. |
| CRISPR-Act3.0 for highly efficient multiplexed gene activation in plants. | Pan C, Wu X, Markel K, Malzahn AA, Kundagrami N, Sretenovic S, Zhang Y, Cheng Y, Shih PM, Qi Y | Nat Plants. 2021 Jul;7(7):942-953. doi: 10.1038/s41477-021-00953-7. Epub 2021 Jun 24. |
| CRISPR-Cas12a base editors confer efficient multiplexed genome editing in rice. | Cheng Y, Zhang Y, Li G, Fang H, Sretenovic S, Fan A, Li J, Xu J, Que Q, Qi Y | Plant Commun. 2023 Apr 13:100601. doi: 10.1016/j.xplc.2023.100601. |
| CRISPR-Cas12a enables efficient biallelic gene targeting in rice. | Li S, Zhang Y, Xia L, Qi Y | Plant Biotechnol J. 2019 Nov 15. doi: 10.1111/pbi.13295. |
