Adam Cohen Lab Materials

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Title	Authors	Publication
A bioelectrical phase transition patterns the first vertebrate heartbeats.	Jia BZ, Qi Y, Wong-Campos JD, Megason SG, Cohen AE	Nature. 2023 Oct;622(7981):149-155. doi: 10.1038/s41586-023-06561-z. Epub 2023 Sep 27.
A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store.	Henderson MJ, Baldwin HA, Werley CA, Boccardo S, Whitaker LR, Yan X, Holt GT, Schreiter ER, Looger LL, Cohen AE, Kim DS, Harvey BK	PLoS One. 2015 Oct 9;10(10):e0139273. doi: 10.1371/journal.pone.0139273. eCollection 2015.
AAV constructs for expressing genetically encoded voltage indicators in mice	(unpublished)
All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins.	Hochbaum DR, Zhao Y, Farhi SL, Klapoetke N, Werley CA, Kapoor V, Zou P, Kralj JM, Maclaurin D, Smedemark-Margulies N, Saulnier JL, Boulting GL, Straub C, Cho YK, Melkonian M, Wong GK, Harrison DJ, Murthy VN, Sabatini BL, Boyden ES, Campbell RE, Cohen AE	Nat Methods. 2014 Aug;11(8):825-33. doi: 10.1038/nmeth.3000. Epub 2014 Jun 22.
All-Optical Electrophysiology Reveals the Role of Lateral Inhibition in Sensory Processing in Cortical Layer 1.	Fan LZ, Kheifets S, Bohm UL, Wu H, Piatkevich KD, Xie ME, Parot V, Ha Y, Evans KE, Boyden ES, Takesian AE, Cohen AE	Cell. 2020 Jan 23. pii: S0092-8674(20)30047-7. doi: 10.1016/j.cell.2020.01.001.
All-optical mapping of Ca(2+) transport and homeostasis in dendrites.	Hayward RF, Cohen AE	Cell Calcium. 2024 Dec 5;125:102983. doi: 10.1016/j.ceca.2024.102983.
All-optical mapping of cAMP transport reveals rules of sub-cellular localization	Xiang KM, Park P, Koren SA, Hayward RF, Cohen AE	bioRxiv 2023
All-optical synaptic electrophysiology probes mechanism of ketamine-induced disinhibition.	Fan LZ, Nehme R, Adam Y, Jung ES, Wu H, Eggan K, Arnold DB, Cohen AE	Nat Methods. 2018 Oct;15(10):823-831. doi: 10.1038/s41592-018-0142-8. Epub 2018 Oct 1.
Bioelectrical domain walls in homogeneous tissues.	McNamara HM, Salegame R, Al Tanoury Z, Xu H, Begum S, Ortiz G, Pourquie O, Cohen AE	Nat Phys. 2020 Mar;16(3):357-364. doi: 10.1038/s41567-019-0765-4. Epub 2020 Jan 20.
Bright and fast multicoloured voltage reporters via electrochromic FRET.	Zou P, Zhao Y, Douglass AD, Hochbaum DR, Brinks D, Werley CA, Harrison DJ, Campbell RE, Cohen AE	Nat Commun. 2014 Aug 13;5:4625. doi: 10.1038/ncomms5625.

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	ID	Plasmid	Gene/Insert	Vector Type	Publication
100.1.731065.51694	51694	DRH296: FCK-Optopatch2	Optopatch2	Mammalian Expression, Lentiviral	All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins. Nat Methods. 2014 Aug;11(8):825-33. doi: 10.1038/nmeth.3000. Epub 2014 Jun 22.
100.1.108475.51692	51692	DRH334: FCK-QuasAr2-mO2	QuasAr2-mOrange	Mammalian Expression, Lentiviral	All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins. Nat Methods. 2014 Aug;11(8):825-33. doi: 10.1038/nmeth.3000. Epub 2014 Jun 22.
50.199.470866.163046	163046	pMOS028: Mitycam calcium sensor (mitochondrial)	Mitycam	Mammalian Expression, Lentiviral	Multiplexed Optical Sensors in Arrayed Islands of Cells for multimodal recordings of cellular physiology. Nat Commun. 2020 Aug 4;11(1):3881. doi: 10.1038/s41467-020-17607-5.
50.168.286664.163045	163045	pMOS008: GCaMP6F calcium sensor (cytosolic)	GCaMP6F	Mammalian Expression, Lentiviral	Multiplexed Optical Sensors in Arrayed Islands of Cells for multimodal recordings of cellular physiology. Nat Commun. 2020 Aug 4;11(1):3881. doi: 10.1038/s41467-020-17607-5.
50.94.872711.65227	65227	pMOS003-lenti-CMV-GCaMPer	GCaMPer	Mammalian Expression, Lentiviral	A Low Affinity GCaMP3 Variant (GCaMPer) for Imaging the Endoplasmic Reticulum Calcium Store. PLoS One. 2015 Oct 9;10(10):e0139273. doi: 10.1371/journal.pone.0139273. eCollection 2015.
50.71.951399.163061	163061	pMOS007: PercevalHR ATP/ADP sensor (cytosolic)	PercevalHR	Mammalian Expression, Lentiviral	Multiplexed Optical Sensors in Arrayed Islands of Cells for multimodal recordings of cellular physiology. Nat Commun. 2020 Aug 4;11(1):3881. doi: 10.1038/s41467-020-17607-5.
50.10.773166.163060	163060	pMOS023: Peredox NADH/NAD+ sensor (cytosolic)	Peredox	Mammalian Expression, Lentiviral	Multiplexed Optical Sensors in Arrayed Islands of Cells for multimodal recordings of cellular physiology. Nat Commun. 2020 Aug 4;11(1):3881. doi: 10.1038/s41467-020-17607-5.
50.2.476216.33780	33780	pJMK001	Proteorhodopsin Optical Proton Sensor	Bacterial Expression	Electrical spiking in Escherichia coli probed with a fluorescent voltage-indicating protein. Science. 2011 Jul 15;333(6040):345-8.
50.2.222777.51697	51697	DRH337: AAV-hsyn-CheRiff-eGFP	CheRiff-eGFP	AAV	All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins. Nat Methods. 2014 Aug;11(8):825-33. doi: 10.1038/nmeth.3000. Epub 2014 Jun 22.
50.2.120130.51693	51693	DRH313: FCK-CheRiff-eGFP	CheRiff-eGFP	Mammalian Expression, Lentiviral	All-optical electrophysiology in mammalian neurons using engineered microbial rhodopsins. Nat Methods. 2014 Aug;11(8):825-33. doi: 10.1038/nmeth.3000. Epub 2014 Jun 22.

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	ID	Kit
20.5.432124.1000000175	1000000175	Plasmids for Multiplexed Optical Sensors Arrayed in Islands of Cells (MOSAIC)