pEN396 - pCAGGS-Tir1-V5-2A-PuroR TIGRE donor Citations (8)
Originally described in: Targeted Degradation of CTCF Decouples Local Insulation of Chromosome Domains from Genomic Compartmentalization.Nora EP, Goloborodko A, Valton AL, Gibcus JH, Uebersohn A, Abdennur N, Dekker J, Mirny LA, Bruneau BG Cell. 2017 May 18;169(5):930-944.e22. doi: 10.1016/j.cell.2017.05.004. PubMed Journal
Articles Citing pEN396 - pCAGGS-Tir1-V5-2A-PuroR TIGRE donor
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| Regulation of single-cell genome organization into TADs and chromatin nanodomains. Szabo Q, Donjon A, Jerkovic I, Papadopoulos GL, Cheutin T, Bonev B, Nora EP, Bruneau BG, Bantignies F, Cavalli G. Nat Genet. 2020 Nov;52(11):1151-1157. doi: 10.1038/s41588-020-00716-8. Epub 2020 Oct 19. PubMed |
WAPL maintains a cohesin loading cycle to preserve cell-type-specific distal gene regulation.
Liu NQ, Maresca M, van den Brand T, Braccioli L, Schijns MMGA, Teunissen H, Bruneau BG, Nora EP, de Wit E.
Nat Genet. 2021 Jan;53(1):100-109. doi: 10.1038/s41588-020-00744-4. Epub 2020 Dec 14.
PubMed
Associated Plasmids |
The deubiquitinase Usp9x regulates PRC2-mediated chromatin reprogramming during mouse development.
Macrae TA, Ramalho-Santos M.
Nat Commun. 2021 Mar 25;12(1):1865. doi: 10.1038/s41467-021-21910-0.
PubMed
Associated Plasmids |
| CHD4 Conceals Aberrant CTCF-Binding Sites at TAD Interiors by Regulating Chromatin Accessibility in Mouse Embryonic Stem Cells. Han S, Lee H, Lee AJ, Kim SK, Jung I, Koh GY, Kim TK, Lee D. Mol Cells. 2021 Nov 30;44(11):805-829. doi: 10.14348/molcells.2021.0224. PubMed |
| Single-cell profiling of transcriptome and histone modifications with EpiDamID. Rang FJ, de Luca KL, de Vries SS, Valdes-Quezada C, Boele E, Nguyen PD, Guerreiro I, Sato Y, Kimura H, Bakkers J, Kind J. Mol Cell. 2022 May 19;82(10):1956-1970.e14. doi: 10.1016/j.molcel.2022.03.009. Epub 2022 Apr 1. PubMed |
| Inheritance of repressed chromatin domains during S phase requires the histone chaperone NPM1. Escobar TM, Yu JR, Liu S, Lucero K, Vasilyev N, Nudler E, Reinberg D. Sci Adv. 2022 Apr 29;8(17):eabm3945. doi: 10.1126/sciadv.abm3945. Epub 2022 Apr 27. PubMed |
A cohesin traffic pattern genetically linked to gene regulation.
Valton AL, Venev SV, Mair B, Khokhar ES, Tong AHY, Usaj M, Chan K, Pai AA, Moffat J, Dekker J.
Nat Struct Mol Biol. 2022 Dec 8. doi: 10.1038/s41594-022-00890-9.
PubMed
Associated Plasmids |
| A mouse model with high clonal barcode diversity for joint lineage, transcriptomic, and epigenomic profiling in single cells. Li L, Bowling S, McGeary SE, Yu Q, Lemke B, Alcedo K, Jia Y, Liu X, Ferreira M, Klein AM, Wang SW, Camargo FD. Cell. 2023 Nov 9;186(23):5183-5199.e22. doi: 10.1016/j.cell.2023.09.019. Epub 2023 Oct 17. PubMed |
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