pmScarlet-i_C1 Citations (37)
Originally described in: mScarlet: a bright monomeric red fluorescent protein for cellular imaging.Bindels DS, Haarbosch L, van Weeren L, Postma M, Wiese KE, Mastop M, Aumonier S, Gotthard G, Royant A, Hink MA, Gadella TW Jr Nat Methods. 2016 Nov 21. doi: 10.1038/nmeth.4074. PubMed Journal
Articles Citing pmScarlet-i_C1
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| Importin alpha5 Regulates Anxiety through MeCP2 and Sphingosine Kinase 1. Panayotis N, Sheinin A, Dagan SY, Tsoory MM, Rother F, Vadhvani M, Meshcheriakova A, Koley S, Marvaldi L, Song DA, Reuveny E, Eickholt BJ, Hartmann E, Bader M, Michaelevski I, Fainzilber M. Cell Rep. 2018 Dec 11;25(11):3169-3179.e7. doi: 10.1016/j.celrep.2018.11.066. PubMed |
ER-to-Golgi trafficking of procollagen in the absence of large carriers.
McCaughey J, Stevenson NL, Cross S, Stephens DJ.
J Cell Biol. 2018 Dec 26. pii: jcb.201806035. doi: 10.1083/jcb.201806035.
PubMed
Associated Plasmids |
| A novel isoform of myosin 18A (Myo18Agamma) is an essential sarcomeric protein in mouse heart. Horsthemke M, Nutter LMJ, Bachg AC, Skryabin BV, Honnert U, Zobel T, Bogdan S, Stoll M, Seidl MD, Muller FU, Ravens U, Unger A, Linke WA, van Gorp PRR, de Vries AAF, Bahler M, Hanley PJ. J Biol Chem. 2019 May 3;294(18):7202-7218. doi: 10.1074/jbc.RA118.004560. Epub 2019 Feb 8. PubMed |
| A system for production of defective interfering particles in the absence of infectious influenza A virus. Bdeir N, Arora P, Gartner S, Hoffmann M, Reichl U, Pohlmann S, Winkler M. PLoS One. 2019 Mar 1;14(3):e0212757. doi: 10.1371/journal.pone.0212757. eCollection 2019. PubMed |
| Enhanced in vivo-imaging in medaka by optimized anaesthesia, fluorescent protein selection and removal of pigmentation. Lischik CQ, Adelmann L, Wittbrodt J. PLoS One. 2019 Mar 7;14(3):e0212956. doi: 10.1371/journal.pone.0212956. eCollection 2019. PubMed |
| Phase separation of 53BP1 determines liquid-like behavior of DNA repair compartments. Kilic S, Lezaja A, Gatti M, Bianco E, Michelena J, Imhof R, Altmeyer M. EMBO J. 2019 Jul 1:e101379. doi: 10.15252/embj.2018101379. PubMed |
| A real-time, click chemistry imaging approach reveals stimulus-specific subcellular locations of phospholipase D activity. Liang D, Wu K, Tei R, Bumpus TW, Ye J, Baskin JM. Proc Natl Acad Sci U S A. 2019 Jul 30;116(31):15453-15462. doi: 10.1073/pnas.1903949116. Epub 2019 Jul 16. PubMed |
| Locally Activating TrkB Receptor Generates Actin Waves and Specifies Axonal Fate. Woo D, Seo Y, Jung H, Kim S, Kim N, Park SM, Lee H, Lee S, Cho KH, Heo WD. Cell Chem Biol. 2019 Dec 19;26(12):1652-1663.e4. doi: 10.1016/j.chembiol.2019.10.006. Epub 2019 Oct 30. PubMed |
| LDAF1 and Seipin Form a Lipid Droplet Assembly Complex. Chung J, Wu X, Lambert TJ, Lai ZW, Walther TC, Farese RV Jr. Dev Cell. 2019 Dec 2;51(5):551-563.e7. doi: 10.1016/j.devcel.2019.10.006. Epub 2019 Nov 7. PubMed |
| ADAP1 promotes invasive squamous cell carcinoma progression and predicts patient survival. Van Duzer A, Taniguchi S, Elhance A, Tsujikawa T, Oshimori N. Life Sci Alliance. 2019 Dec 2;2(6). pii: 2/6/e201900582. doi: 10.26508/lsa.201900582. Print 2019 Dec. PubMed |
| hiPSC-Derived Cardiomyocyte Model of LQT2 Syndrome Derived from Asymptomatic and Symptomatic Mutation Carriers Reproduces Clinical Differences in Aggregates but Not in Single Cells. Shah D, Prajapati C, Penttinen K, Cherian RM, Koivumaki JT, Alexanova A, Hyttinen J, Aalto-Setala K. Cells. 2020 May 7;9(5). pii: cells9051153. doi: 10.3390/cells9051153. PubMed |
| Tumor-initiating cells establish an IL-33-TGF-beta niche signaling loop to promote cancer progression. Taniguchi S, Elhance A, Van Duzer A, Kumar S, Leitenberger JJ, Oshimori N. Science. 2020 Jul 17;369(6501):eaay1813. doi: 10.1126/science.aay1813. PubMed |
Stable integration of an optimized inducible promoter system enables spatiotemporal control of gene expression throughout avian development.
Chu D, Nguyen A, Smith SS, Vavrusova Z, Schneider RA.
Biol Open. 2020 Oct 6;9(10). pii: bio.055343. doi: 10.1242/bio.055343.
PubMed
Associated Plasmids |
| Upregulated nicotinic ACh receptor signaling contributes to intestinal stem cell function through activation of Hippo and Notch signaling pathways. Takahashi T, Shiraishi A, Osawa M. Int Immunopharmacol. 2020 Nov;88:106984. doi: 10.1016/j.intimp.2020.106984. Epub 2020 Sep 18. PubMed |
| EphrinB2 clustering by Nipah virus G is required to activate and trap F intermediates at supported lipid bilayer-cell interfaces. Wong JJ, Chen Z, Chung JK, Groves JT, Jardetzky TS. Sci Adv. 2021 Jan 27;7(5). pii: 7/5/eabe1235. doi: 10.1126/sciadv.abe1235. Print 2021 Jan. PubMed |
| Mitochondrial NADP(+) is essential for proline biosynthesis during cell growth. Tran DH, Kesavan R, Rion H, Soflaee MH, Solmonson A, Bezwada D, Vu HS, Cai F, Phillips JA 3rd, DeBerardinis RJ, Hoxhaj G. Nat Metab. 2021 Apr;3(4):571-585. doi: 10.1038/s42255-021-00374-y. Epub 2021 Apr 8. PubMed |
| Rab34 GTPase mediates ciliary membrane formation in the intracellular ciliogenesis pathway. Ganga AK, Kennedy MC, Oguchi ME, Gray S, Oliver KE, Knight TA, De La Cruz EM, Homma Y, Fukuda M, Breslow DK. Curr Biol. 2021 Jul 12;31(13):2895-2905.e7. doi: 10.1016/j.cub.2021.04.075. Epub 2021 May 13. PubMed |
| Robustness of epithelial sealing is an emerging property of local ERK feedback driven by cell elimination. Valon L, Davidovic A, Levillayer F, Villars A, Chouly M, Cerqueira-Campos F, Levayer R. Dev Cell. 2021 Jun 21;56(12):1700-1711.e8. doi: 10.1016/j.devcel.2021.05.006. Epub 2021 Jun 2. PubMed |
| An emerging and variant viral promoter of HIV-1 subtype C exhibits low-level gene expression noise. Ali H, Bhange D, Mehta K, Gohil Y, Prajapati HK, Byrareddy SN, Buch S, Ranga U. Retrovirology. 2021 Sep 19;18(1):27. doi: 10.1186/s12977-021-00572-2. PubMed |
HI-NESS: a family of genetically encoded DNA labels based on a bacterial nucleoid-associated protein.
Rashid FM, Mahlandt E, van der Vaart M, Boer DEC, Varela Alvarez M, Henneman B, Brocken DJW, Voskamp P, Blok AJ, Shimizu TS, Meijer AH, Luijsterburg MS, Goedhart J, Cremazy FGE, Dame RT.
Nucleic Acids Res. 2021 Nov 4. pii: 6414584. doi: 10.1093/nar/gkab993.
PubMed
Associated Plasmids |
| A mechanistic basis for the malignant progression of salivary gland tumors. Taniguchi S, Tanaka Y, Elhance A, Oshimori N. iScience. 2021 Nov 25;24(12):103508. doi: 10.1016/j.isci.2021.103508. eCollection 2021 Dec 17. PubMed |
Direct visualization by FRET-FLIM of a putative mechanosome complex involving Src, Pyk2 and MBD2 in living MLO-Y4 cells.
Day RN, Day KH, Pavalko FM.
PLoS One. 2021 Dec 23;16(12):e0261660. doi: 10.1371/journal.pone.0261660. eCollection 2021.
PubMed
Associated Plasmids |
| Force-generating apoptotic cells orchestrate avian neural tube bending. Roellig D, Theis S, Proag A, Allio G, Benazeraf B, Gros J, Suzanne M. Dev Cell. 2022 Mar 28;57(6):707-718.e6. doi: 10.1016/j.devcel.2022.02.020. Epub 2022 Mar 17. PubMed |
| Selective axonal transport through branch junctions is directed by growth cone signaling and mediated by KIF1/kinesin-3 motors. Tymanskyj SR, Curran BM, Ma L. Cell Rep. 2022 Apr 26;39(4):110748. doi: 10.1016/j.celrep.2022.110748. PubMed |
| A novel Fiji/ImageJ plugin for the rapid analysis of blebbing cells. Vosatka KW, Lavenus SB, Logue JS. PLoS One. 2022 Apr 29;17(4):e0267740. doi: 10.1371/journal.pone.0267740. eCollection 2022. PubMed |
| Stress-induced phase separation of ERES components into Sec bodies precedes ER exit inhibition in mammalian cells. van Leeuwen W, Nguyen DTM, Grond R, Veenendaal T, Rabouille C, Farias GG. J Cell Sci. 2022 Dec 1;135(23):jcs260294. doi: 10.1242/jcs.260294. Epub 2022 Dec 1. PubMed |
| Development of single-molecule ubiquitination mediated fluorescence complementation to visualize protein ubiquitination dynamics in dendrites. Ifrim MF, Janusz-Kaminska A, Bassell GJ. Cell Rep. 2022 Nov 15;41(7):111658. doi: 10.1016/j.celrep.2022.111658. PubMed |
Integrated transcriptome and proteome analysis reveals posttranscriptional regulation of ribosomal genes in human brain organoids.
Sidhaye J, Trepte P, Sepke N, Novatchkova M, Schutzbier M, Durnberger G, Mechtler K, Knoblich JA.
Elife. 2023 Mar 29;12:e85135. doi: 10.7554/eLife.85135.
PubMed
Associated Plasmids |
| Centralspindlin proteins Pavarotti and Tumbleweed along with WASH regulate nuclear envelope budding. Davidson KA, Nakamura M, Verboon JM, Parkhurst SM. J Cell Biol. 2023 Aug 7;222(8):e202211074. doi: 10.1083/jcb.202211074. Epub 2023 May 10. PubMed |
| Distinct Assemblies of Heterodimeric Cytokine Receptors Govern Stemness Programs in Leukemia. Kan WL, Dhagat U, Kaufmann KB, Hercus TR, Nero TL, Zeng AGX, Toubia J, Barry EF, Broughton SE, Gomez GA, Benard BA, Dottore M, Cheung Tung Shing KS, Boutzen H, Samaraweera SE, Simpson KJ, Jin L, Goodall GJ, Begley CG, Thomas D, Ekert PG, Tvorogov D, D'Andrea RJ, Dick JE, Parker MW, Lopez AF. Cancer Discov. 2023 Aug 4;13(8):1922-1947. doi: 10.1158/2159-8290.CD-22-1396. PubMed |
| Nuclear lamina strain states revealed by intermolecular force biosensor. Danielsson BE, George Abraham B, Mantyla E, Cabe JI, Mayer CR, Rekonen A, Ek F, Conway DE, Ihalainen TO. Nat Commun. 2023 Jun 30;14(1):3867. doi: 10.1038/s41467-023-39563-6. PubMed |
| Cas phosphorylation regulates focal adhesion assembly. Kumar S, Stainer A, Dubrulle J, Simpkins C, Cooper JA. Elife. 2023 Jul 25;12:e90234. doi: 10.7554/eLife.90234. PubMed |
| Live-cell imaging unveils distinct R-loop populations with heterogeneous dynamics. Martin RM, de Almeida MR, Gameiro E, de Almeida SF. Nucleic Acids Res. 2023 Nov 10;51(20):11010-11023. doi: 10.1093/nar/gkad812. PubMed |
| Rab11 regulates autophagy at dendritic spines in an mTOR- and NMDA-dependent manner. Janusz-Kaminska A, Brzozowska A, Tempes A, Urbanska M, Blazejczyk M, Milek J, Kuzniewska B, Zeng J, Weslawski J, Kisielewska K, Bassell GJ, Jaworski J. Mol Biol Cell. 2024 Mar 1;35(3):ar43. doi: 10.1091/mbc.E23-02-0060. Epub 2024 Jan 31. PubMed |
| KIS counteracts PTBP2 and regulates alternative exon usage in neurons. Moreno-Aguilera M, Neher AM, Mendoza MB, Dodel M, Mardakheh FK, Ortiz R, Gallego C. Elife. 2024 Apr 10;13:e96048. doi: 10.7554/eLife.96048. PubMed |
| Persistent TFIIH binding to non-excised DNA damage causes cell and developmental failure. Muniesa-Vargas A, Davo-Martinez C, Ribeiro-Silva C, van der Woude M, Thijssen KL, Haspels B, Hackes D, Kaynak UU, Kanaar R, Marteijn JA, Theil AF, Kuijten MMP, Vermeulen W, Lans H. Nat Commun. 2024 Apr 25;15(1):3490. doi: 10.1038/s41467-024-47935-9. PubMed |
| Development of rhesus macaque astrocyte cell lines supporting infection with a panel of viruses. Reiter S, Sun T, Gartner S, Pohlmann S, Winkler M. PLoS One. 2024 May 14;19(5):e0303059. doi: 10.1371/journal.pone.0303059. eCollection 2024. PubMed |
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