rAAV2-retro helper Citations (38)
Originally described in: A Designer AAV Variant Permits Efficient Retrograde Access to Projection Neurons.Tervo DG, Hwang BY, Viswanathan S, Gaj T, Lavzin M, Ritola KD, Lindo S, Michael S, Kuleshova E, Ojala D, Huang CC, Gerfen CR, Schiller J, Dudman JT, Hantman AW, Looger LL, Schaffer DV, Karpova AY Neuron. 2016 Oct 6. pii: S0896-6273(16)30580-3. doi: 10.1016/j.neuron.2016.09.021. PubMed Journal
Articles Citing rAAV2-retro helper
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| Anatomical Evidence for a Direct Projection from Purkinje Cells in the Mouse Cerebellar Vermis to Medial Parabrachial Nucleus. Hashimoto M, Yamanaka A, Kato S, Tanifuji M, Kobayashi K, Yaginuma H. Front Neural Circuits. 2018 Feb 7;12:6. doi: 10.3389/fncir.2018.00006. eCollection 2018. PubMed |
| The locus coeruleus drives disinhibition in the midline thalamus via a dopaminergic mechanism. Beas BS, Wright BJ, Skirzewski M, Leng Y, Hyun JH, Koita O, Ringelberg N, Kwon HB, Buonanno A, Penzo MA. Nat Neurosci. 2018 Jul;21(7):963-973. doi: 10.1038/s41593-018-0167-4. Epub 2018 Jun 18. PubMed |
| A synaptic threshold mechanism for computing escape decisions. Evans DA, Stempel AV, Vale R, Ruehle S, Lefler Y, Branco T. Nature. 2018 Jun;558(7711):590-594. doi: 10.1038/s41586-018-0244-6. Epub 2018 Jun 20. PubMed |
| An Intersectional Approach to Target Neural Circuits With Cell- and Projection-Type Specificity: Validation in the Mesolimbic Dopamine System. Kakava-Georgiadou N, Zwartkruis MM, Bullich-Vilarrubias C, Luijendijk MCM, Garner KM, van der Plasse G, Adan RAH. Front Mol Neurosci. 2019 Feb 28;12:49. doi: 10.3389/fnmol.2019.00049. eCollection 2019. PubMed |
| Production of Viral Constructs for Neuroanatomy, Calcium Imaging, and Optogenetics. Chen SH, Haam J, Walker M, Scappini E, Naughton J, Martin NP. Curr Protoc Neurosci. 2019 Apr;87(1):e66. doi: 10.1002/cpns.66. Epub 2019 Mar 18. PubMed |
| Amygdala ensembles encode behavioral states. Grundemann J, Bitterman Y, Lu T, Krabbe S, Grewe BF, Schnitzer MJ, Luthi A. Science. 2019 Apr 19;364(6437). pii: 364/6437/eaav8736. doi: 10.1126/science.aav8736. Epub 2019 Apr 18. PubMed |
Plug-and-Play Protein Modification Using Homology-Independent Universal Genome Engineering.
Gao Y, Hisey E, Bradshaw TWA, Erata E, Brown WE, Courtland JL, Uezu A, Xiang Y, Diao Y, Soderling SH.
Neuron. 2019 Aug 21;103(4):583-597.e8. doi: 10.1016/j.neuron.2019.05.047. Epub 2019 Jul 1.
PubMed
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| Activity of Insula to Basolateral Amygdala Projecting Neurons is Necessary and Sufficient for Taste Valence Representation. Kayyal H, Yiannakas A, Kolatt Chandran S, Khamaisy M, Sharma V, Rosenblum K. J Neurosci. 2019 Nov 20;39(47):9369-9382. doi: 10.1523/JNEUROSCI.0752-19.2019. Epub 2019 Oct 9. PubMed |
| A Novel Next-Generation Sequencing and Analysis Platform to Assess the Identity of Recombinant Adeno-Associated Viral Preparations from Viral DNA Extracts. Guerin K, Rego M, Bourges D, Ersing I, Haery L, Harten DeMaio K, Sanders E, Tasissa M, Kostman M, Tillgren M, Makana Hanley L, Mueller I, Mitsopoulos A, Fan M. Hum Gene Ther. 2020 Jun;31(11-12):664-678. doi: 10.1089/hum.2019.277. Epub 2020 Apr 15. PubMed |
| Spinal astrocytes in superficial laminae gate brainstem descending control of mechanosensory hypersensitivity. Kohro Y, Matsuda T, Yoshihara K, Kohno K, Koga K, Katsuragi R, Oka T, Tashima R, Muneta S, Yamane T, Okada S, Momokino K, Furusho A, Hamase K, Oti T, Sakamoto H, Hayashida K, Kobayashi R, Horii T, Hatada I, Tozaki-Saitoh H, Mikoshiba K, Taylor V, Inoue K, Tsuda M. Nat Neurosci. 2020 Nov;23(11):1376-1387. doi: 10.1038/s41593-020-00713-4. Epub 2020 Oct 5. PubMed |
| AAV9-Retro mediates efficient transduction with axon terminal absorption and blood-brain barrier transportation. Lin K, Zhong X, Li L, Ying M, Yang T, Zhang Z, He X, Xu F. Mol Brain. 2020 Oct 14;13(1):138. doi: 10.1186/s13041-020-00679-1. PubMed |
| Intrinsic braking role of descending locus coeruleus noradrenergic neurons in acute and chronic itch in mice. Koga K, Shiraishi Y, Yamagata R, Tozaki-Saitoh H, Shiratori-Hayashi M, Tsuda M. Mol Brain. 2020 Oct 27;13(1):144. doi: 10.1186/s13041-020-00688-0. PubMed |
| A ventrolateral medulla-midline thalamic circuit for hypoglycemic feeding. Sofia Beas B, Gu X, Leng Y, Koita O, Rodriguez-Gonzalez S, Kindel M, Matikainen-Ankney BA, Larsen RS, Kravitz AV, Hoon MA, Penzo MA. Nat Commun. 2020 Dec 4;11(1):6218. doi: 10.1038/s41467-020-19980-7. PubMed |
| Single cell plasticity and population coding stability in auditory thalamus upon associative learning. Taylor JA, Hasegawa M, Benoit CM, Freire JA, Theodore M, Ganea DA, Innocenti SM, Lu T, Grundemann J. Nat Commun. 2021 Apr 26;12(1):2438. doi: 10.1038/s41467-021-22421-8. PubMed |
| Divergent projections of the paraventricular nucleus of the thalamus mediate the selection of passive and active defensive behaviors. Ma J, du Hoffmann J, Kindel M, Beas BS, Chudasama Y, Penzo MA. Nat Neurosci. 2021 Oct;24(10):1429-1440. doi: 10.1038/s41593-021-00912-7. Epub 2021 Aug 19. PubMed |
Revisiting astrocyte to neuron conversion with lineage tracing in vivo.
Wang LL, Serrano C, Zhong X, Ma S, Zou Y, Zhang CL.
Cell. 2021 Oct 14;184(21):5465-5481.e16. doi: 10.1016/j.cell.2021.09.005. Epub 2021 Sep 27.
PubMed
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| Epigenomic diversity of cortical projection neurons in the mouse brain. Zhang Z, Zhou J, Tan P, Pang Y, Rivkin AC, Kirchgessner MA, Williams E, Lee CT, Liu H, Franklin AD, Miyazaki PA, Bartlett A, Aldridge AI, Vu M, Boggeman L, Fitzpatrick C, Nery JR, Castanon RG, Rashid M, Jacobs MW, Ito-Cole T, O'Connor C, Pinto-Duartec A, Dominguez B, Smith JB, Niu SY, Lee KF, Jin X, Mukamel EA, Behrens MM, Ecker JR, Callaway EM. Nature. 2021 Oct;598(7879):167-173. doi: 10.1038/s41586-021-03223-w. Epub 2021 Oct 6. PubMed |
| TTP protects against acute liver failure by regulating CCL2 and CCL5 through m6A RNA methylation. Xiao P, Li M, Zhou M, Zhao X, Wang C, Qiu J, Fang Q, Jiang H, Dong H, Zhou R. JCI Insight. 2021 Dec 8;6(23). pii: 149276. doi: 10.1172/jci.insight.149276. PubMed |
| A fast, aqueous, reversible three-day tissue clearing method for adult and embryonic mouse brain and whole body. Kosmidis S, Negrean A, Dranovsky A, Losonczy A, Kandel ER. Cell Rep Methods. 2021 Nov 22;1(7):100090. doi: 10.1016/j.crmeth.2021.100090. Epub 2021 Oct 11. PubMed |
| VTA-projecting cerebellar neurons mediate stress-dependent depression-like behaviors. Baek SJ, Park JS, Kim J, Yamamoto Y, Tanaka-Yamamoto K. Elife. 2022 Feb 14;11. pii: 72981. doi: 10.7554/eLife.72981. PubMed |
| Telencephalic outputs from the medial entorhinal cortex are copied directly to the hippocampus. Tsoi SY, Oncul M, Svahn E, Robertson M, Bogdanowicz Z, McClure C, Surmeli G. Elife. 2022 Feb 21;11. pii: 73162. doi: 10.7554/eLife.73162. PubMed |
| Claustrum mediates bidirectional and reversible control of stress-induced anxiety responses. Niu M, Kasai A, Tanuma M, Seiriki K, Igarashi H, Kuwaki T, Nagayasu K, Miyaji K, Ueno H, Tanabe W, Seo K, Yokoyama R, Ohkubo J, Ago Y, Hayashida M, Inoue KI, Takada M, Yamaguchi S, Nakazawa T, Kaneko S, Okuno H, Yamanaka A, Hashimoto H. Sci Adv. 2022 Mar 18;8(11):eabi6375. doi: 10.1126/sciadv.abi6375. Epub 2022 Mar 18. PubMed |
| Chemogenetic silencing of spinal cord-projecting cortical neurons attenuates Abeta fiber-derived neuropathic allodynia in mice. Fujimori K, Sekine M, Watanabe M, Tashima R, Tozaki-Saitoh H, Tsuda M. Neurosci Res. 2022 Aug;181:115-119. doi: 10.1016/j.neures.2022.05.001. Epub 2022 May 6. PubMed |
Neural circuit pathology driven by Shank3 mutation disrupts social behaviors.
Kim S, Kim YE, Song I, Ujihara Y, Kim N, Jiang YH, Yin HH, Lee TH, Kim IH.
Cell Rep. 2022 Jun 7;39(10):110906. doi: 10.1016/j.celrep.2022.110906.
PubMed
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| The tyrosine capsid mutations on retrograde adeno-associated virus accelerates gene transduction efficiency. Nakahama R, Saito A, Nobe S, Togashi K, Suzuki IK, Uematsu A, Emoto K. Mol Brain. 2022 Aug 8;15(1):70. doi: 10.1186/s13041-022-00957-0. PubMed |
| Protocol to map multi-transmitter neurons in the mouse brain using intersectional strategy. Xu J, Contractor A, Zhu Y. STAR Protoc. 2022 Dec 16;3(4):101907. doi: 10.1016/j.xpro.2022.101907. Epub 2022 Dec 6. PubMed |
| Non-Invasive Electroretinogram Recording with Simultaneous Optogenetics to Dissect Retinal Ganglion Cells Electrophysiological Dynamics. Hong E, Glynn C, Wang Q, Rao S. Biosensors (Basel). 2022 Dec 28;13(1):42. doi: 10.3390/bios13010042. PubMed |
| Cerebrospinal fluid-contacting neuron tracing reveals structural and functional connectivity for locomotion in the mouse spinal cord. Nakamura Y, Kurabe M, Matsumoto M, Sato T, Miyashita S, Hoshina K, Kamiya Y, Tainaka K, Matsuzawa H, Ohno N, Ueno M. Elife. 2023 Feb 21;12:e83108. doi: 10.7554/eLife.83108. PubMed |
| Neurons in the caudal ventrolateral medulla mediate descending pain control. Gu X, Zhang YZ, O'Malley JJ, De Preter CC, Penzo M, Hoon MA. Nat Neurosci. 2023 Apr;26(4):594-605. doi: 10.1038/s41593-023-01268-w. Epub 2023 Mar 9. PubMed |
| Quantitative analysis of rabies virus-based synaptic connectivity tracing. Tran-Van-Minh A, Ye Z, Rancz E. PLoS One. 2023 Mar 30;18(3):e0278053. doi: 10.1371/journal.pone.0278053. eCollection 2023. PubMed |
Semi-automated workflows to quantify AAV transduction in various brain areas and predict gene editing outcome for neurological disorders.
Duarte F, Ramosaj M, Hasanovic E, Regio S, Sipion M, Rey M, Deglon N.
Mol Ther Methods Clin Dev. 2023 Mar 27;29:254-270. doi: 10.1016/j.omtm.2023.03.013. eCollection 2023 Jun 8.
PubMed
Associated Plasmids |
| Cortical somatostatin interneuron subtypes form cell-type-specific circuits. Wu SJ, Sevier E, Dwivedi D, Saldi GA, Hairston A, Yu S, Abbott L, Choi DH, Sherer M, Qiu Y, Shinde A, Lenahan M, Rizzo D, Xu Q, Barrera I, Kumar V, Marrero G, Pronneke A, Huang S, Kullander K, Stafford DA, Macosko E, Chen F, Rudy B, Fishell G. Neuron. 2023 Sep 6;111(17):2675-2692.e9. doi: 10.1016/j.neuron.2023.05.032. Epub 2023 Jun 29. PubMed |
| delete na. unpublished PubMed |
| Chemogenetic dissection of a prefrontal-hypothalamic circuit for socially subjective reward valuation in macaques. Noritake A, Ninomiya T, Kobayashi K, Isoda M. Nat Commun. 2023 Jul 20;14(1):4372. doi: 10.1038/s41467-023-40143-x. PubMed |
Circuit-specific gene therapy reverses core symptoms in a primate Parkinson's disease model.
Chen Y, Hong Z, Wang J, Liu K, Liu J, Lin J, Feng S, Zhang T, Shan L, Liu T, Guo P, Lin Y, Li T, Chen Q, Jiang X, Li A, Li X, Li Y, Wilde JJ, Bao J, Dai J, Lu Z.
Cell. 2023 Nov 22;186(24):5394-5410.e18. doi: 10.1016/j.cell.2023.10.004. Epub 2023 Nov 2.
PubMed
Associated Plasmids |
| Brain-wide correspondence of neuronal epigenomics and distant projections. Zhou J, Zhang Z, Wu M, Liu H, Pang Y, Bartlett A, Peng Z, Ding W, Rivkin A, Lagos WN, Williams E, Lee CT, Miyazaki PA, Aldridge A, Zeng Q, Salinda JLA, Claffey N, Liem M, Fitzpatrick C, Boggeman L, Yao Z, Smith KA, Tasic B, Altshul J, Kenworthy MA, Valadon C, Nery JR, Castanon RG, Patne NS, Vu M, Rashid M, Jacobs M, Ito T, Osteen J, Emerson N, Lee J, Cho S, Rink J, Huang HH, Pinto-Duartec A, Dominguez B, Smith JB, O'Connor C, Zeng H, Chen S, Lee KF, Mukamel EA, Jin X, Margarita Behrens M, Ecker JR, Callaway EM. Nature. 2023 Dec;624(7991):355-365. doi: 10.1038/s41586-023-06823-w. Epub 2023 Dec 13. PubMed |
Long-term labeling and imaging of synaptically connected neuronal networks in vivo using double-deletion-mutant rabies viruses.
Jin L, Sullivan HA, Zhu M, Lavin TK, Matsuyama M, Fu X, Lea NE, Xu R, Hou Y, Rutigliani L, Pruner M, Babcock KR, Ip JPK, Hu M, Daigle TL, Zeng H, Sur M, Feng G, Wickersham IR.
Nat Neurosci. 2024 Jan 11. doi: 10.1038/s41593-023-01545-8.
PubMed
Associated Plasmids |
| Delete_ARID1B controls transcriptional programs of axon projection in an organoid model of the human corpus callosum. Martins-Costa C, Wiegers A, Pham VA, Sidhaye J, Doleschall B, Novatchkova M, Lendl T, Piber M, Peer A, Moseneder P, Stuempflen M, Chow SYA, Seidl R, Prayer D, Hoftberger R, Kasprian G, Ikeuchi Y, Corsini NS, Knoblich JA. Cell Stem Cell. 2024 Jun 6;31(6):866-885.e14. doi: 10.1016/j.stem.2024.04.014. Epub 2024 May 7. PubMed |
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