pDHJS3 AS+
(Plasmid
#78236)
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PurposeOne of four plasmids needed to create the double Holliday junction substrate (DHJS).
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Depositing Lab
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Sequence Information
Ordering
Item | Catalog # | Description | Quantity | Price (USD) | |
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Plasmid | 78236 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $85 |
Backbone
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Vector backbonepBluescript SK+
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Backbone manufacturerStratagene
- Backbone size w/o insert (bp) 2961
- Total vector size (bp) 3413
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Modifications to backboneinserted two loxP sites with sequence A in between
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Vector typephagemid
Growth in Bacteria
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Bacterial Resistance(s)Ampicillin, 100 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Growth instructionsThis plasmid requires a helper phagemid to make single stranded DNA. Suggested helper phaemids: M13K07 (available from NEB) or pM13g (available from Andrew Bradbury at Los Alamos National Laboratory- PMID: 17088290). If using M13K07 helper phagemid, transform plasmid DNA in XL2 MRF'. If using pM13g helper phagemid, transform plasmid DNA in DH5alpha.
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Copy numberHigh Copy
Gene/Insert 1
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Gene/Insert nameloxP
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SpeciesP1
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Insert Size (bp)34
Cloning Information for Gene/Insert 1
- Cloning method Restriction Enzyme
- 5′ cloning site BglII (not destroyed)
- 3′ cloning site EcoRI (not destroyed)
- 5′ sequencing primer none (Common Sequencing Primers)
Gene/Insert 2
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Gene/Insert namesequence "A"
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SpeciesD. melanogaster (fly)
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Insert Size (bp)300
Cloning Information for Gene/Insert 2
- Cloning method Restriction Enzyme
- 5′ cloning site EcoRI (not destroyed)
- 3′ cloning site XbaI (not destroyed)
- 5′ sequencing primer none (Common Sequencing Primers)
Gene/Insert 3
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Gene/Insert nameloxP2
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SpeciesP1
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Insert Size (bp)34
Cloning Information for Gene/Insert 3
- Cloning method Restriction Enzyme
- 5′ cloning site XbaI (not destroyed)
- 3′ cloning site NdeI (not destroyed)
- 5′ sequencing primer none (Common Sequencing Primers)
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
pDHJS3 AS+ was a gift from Tao-shih Hsieh (Addgene plasmid # 78236 ; http://n2t.net/addgene:78236 ; RRID:Addgene_78236) -
For your References section:
A novel, topologically constrained DNA molecule containing a double Holliday junction: design, synthesis, and initial biochemical characterization. Plank JL, Hsieh TS. J Biol Chem. 2006 Jun 23;281(25):17510-6. Epub 2006 Apr 11. 10.1074/jbc.M602933200 PubMed 16608853