pcDNA3-Clover Citations (34)
Originally described in: Improving FRET dynamic range with bright green and red fluorescent proteins.Lam AJ, St-Pierre F, Gong Y, Marshall JD, Cranfill PJ, Baird MA, McKeown MR, Wiedenmann J, Davidson MW, Schnitzer MJ, Tsien RY, Lin MZ Nat Methods. 2012 Sep 9. doi: 10.1038/nmeth.2171. PubMed Journal
Articles Citing pcDNA3-Clover
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| KIR3DS1-Specific D0 Domain Polymorphisms Disrupt KIR3DL1 Surface Expression and HLA Binding. Mulrooney TJ, Zhang AC, Goldgur Y, Boudreau JE, Hsu KC. J Immunol. 2015 Aug 1;195(3):1242-50. doi: 10.4049/jimmunol.1500243. Epub 2015 Jun 24. PubMed |
Nuclear domain 'knock-in' screen for the evaluation and identification of small molecule enhancers of CRISPR-based genome editing.
Pinder J, Salsman J, Dellaire G.
Nucleic Acids Res. 2015 Oct 30;43(19):9379-92. doi: 10.1093/nar/gkv993. Epub 2015 Oct 1.
PubMed
Associated Plasmids |
| ClearSee: a rapid optical clearing reagent for whole-plant fluorescence imaging. Kurihara D, Mizuta Y, Sato Y, Higashiyama T. Development. 2015 Dec 1;142(23):4168-79. doi: 10.1242/dev.127613. Epub 2015 Oct 22. PubMed |
Developing Fast Fluorescent Protein Voltage Sensors by Optimizing FRET Interactions.
Sung U, Sepehri-Rad M, Piao HH, Jin L, Hughes T, Cohen LB, Baker BJ.
PLoS One. 2015 Nov 20;10(11):e0141585. doi: 10.1371/journal.pone.0141585. eCollection 2015.
PubMed
Associated Plasmids |
| CCR5 Disruption in Induced Pluripotent Stem Cells Using CRISPR/Cas9 Provides Selective Resistance of Immune Cells to CCR5-tropic HIV-1 Virus. Kang H, Minder P, Park MA, Mesquitta WT, Torbett BE, Slukvin II. Mol Ther Nucleic Acids. 2015 Dec 15;4:e268. doi: 10.1038/mtna.2015.42. PubMed |
| In vivo subcellular resolution optical imaging in the lung reveals early metastatic proliferation and motility. Entenberg D, Rodriguez-Tirado C, Kato Y, Kitamura T, Pollard JW, Condeelis J. Intravital. 2015 Sep-Dec;4(3). pii: e1086613. PubMed |
| Tip-localized receptors control pollen tube growth and LURE sensing in Arabidopsis. Takeuchi H, Higashiyama T. Nature. 2016 Mar 10;531(7593):245-8. doi: 10.1038/nature17413. PubMed |
Rapid Protein Depletion in Human Cells by Auxin-Inducible Degron Tagging with Short Homology Donors.
Natsume T, Kiyomitsu T, Saga Y, Kanemaki MT.
Cell Rep. 2016 Apr 5;15(1):210-8. doi: 10.1016/j.celrep.2016.03.001. Epub 2016 Mar 24.
PubMed
Associated Plasmids |
| FRET reveals multiple interaction states between two component signalling system proteins of M. tuberculosis. Agrawal R, Kumar V P, Ramanan H, Saini DK. Biochim Biophys Acta. 2016 Jul;1860(7):1498-507. doi: 10.1016/j.bbagen.2016.04.011. Epub 2016 Apr 19. PubMed |
| Developmentally-regulated RNA-binding Protein 1 (Drb1)/RNA-binding Motif Protein 45 (RBM45), a Nuclear-cytoplasmic Trafficking Protein, Forms TAR DNA-binding Protein 43 (TDP-43)-mediated Cytoplasmic Aggregates. Mashiko T, Sakashita E, Kasashima K, Tominaga K, Kuroiwa K, Nozaki Y, Matsuura T, Hamamoto T, Endo H. J Biol Chem. 2016 May 12. pii: jbc.M115.712232. PubMed |
| The microfluidic lighthouse: an omnidirectional gradient generator. Nakajima A, Ishida M, Fujimori T, Wakamoto Y, Sawai S. Lab Chip. 2016 Nov 1;16(22):4382-4394. PubMed |
| Single Amino Acid Substitution N659D in HIV-2 Envelope Glycoprotein (Env) Impairs Viral Release and Hampers BST-2 Antagonism. Dufrasne FE, Lombard C, Goubau P, Ruelle J. Viruses. 2016 Oct 14;8(10). pii: E285. PubMed |
| A KCNC3 mutation causes a neurodevelopmental, non-progressive SCA13 subtype associated with dominant negative effects and aberrant EGFR trafficking. Khare S, Nick JA, Zhang Y, Galeano K, Butler B, Khoshbouei H, Rayaprolu S, Hathorn T, Ranum LPW, Smithson L, Golde TE, Paucar M, Morse R, Raff M, Simon J, Nordenskjold M, Wirdefeldt K, Rincon-Limas DE, Lewis J, Kaczmarek LK, Fernandez-Funez P, Nick HS, Waters MF. PLoS One. 2017 May 3;12(5):e0173565. doi: 10.1371/journal.pone.0173565. eCollection 2017. PubMed |
| Loss of PRP4K drives anoikis resistance in part by dysregulation of epidermal growth factor receptor endosomal trafficking. Corkery DP, Clarke LE, Gebremeskel S, Salsman J, Pinder J, Le Page C, Meunier L, Xu Z, Mes-Masson AM, Berman JN, Johnston B, Dellaire G. Oncogene. 2018 Jan 11;37(2):174-184. doi: 10.1038/onc.2017.318. Epub 2017 Sep 11. PubMed |
| A common mechanism by which type 2A von Willebrand disease mutations enhance ADAMTS13 proteolysis revealed with a von Willebrand factor A2 domain FRET construct. Lynch CJ, Cawte AD, Millar CM, Rueda D, Lane DA. PLoS One. 2017 Nov 29;12(11):e0188405. doi: 10.1371/journal.pone.0188405. eCollection 2017. PubMed |
| C-terminal proline deletions in KCNC3 cause delayed channel inactivation and an adult-onset progressive SCA13 with spasticity. Khare S, Galeano K, Zhang Y, Nick JA, Nick HS, Subramony SH, Sampson J, Kaczmarek LK, Waters MF. Cerebellum. 2018 Oct;17(5):692-697. doi: 10.1007/s12311-018-0950-5. PubMed |
| Nonstimulatory peptide-MHC enhances human T-cell antigen-specific responses by amplifying proximal TCR signaling. Zhao X, Sankaran S, Yap J, Too CT, Ho ZZ, Dolton G, Legut M, Ren EC, Sewell AK, Bertoletti A, MacAry PA, Brzostek J, Gascoigne NRJ. Nat Commun. 2018 Jul 13;9(1):2716. doi: 10.1038/s41467-018-05288-0. PubMed |
Tunable molecular tension sensors reveal extension-based control of vinculin loading.
LaCroix AS, Lynch AD, Berginski ME, Hoffman BD.
eLife. 2018 Jul 19;7. pii: 33927. doi: 10.7554/eLife.33927.
PubMed
Associated Plasmids |
| A high-throughput screen of real-time ATP levels in individual cells reveals mechanisms of energy failure. Mendelsohn BA, Bennett NK, Darch MA, Yu K, Nguyen MK, Pucciarelli D, Nelson M, Horlbeck MA, Gilbert LA, Hyun W, Kampmann M, Nakamura JL, Nakamura K. PLoS Biol. 2018 Aug 27;16(8):e2004624. doi: 10.1371/journal.pbio.2004624. eCollection 2018 Aug. PubMed |
| Enhanced in vivo-imaging in medaka by optimized anaesthesia, fluorescent protein selection and removal of pigmentation. Lischik CQ, Adelmann L, Wittbrodt J. PLoS One. 2019 Mar 7;14(3):e0212956. doi: 10.1371/journal.pone.0212956. eCollection 2019. PubMed |
| Ultra-soft X-ray system for imaging the early cellular responses to X-ray induced DNA damage. Kochan JA, van den Belt M, von der Lippe J, Desclos ECB, Steurer B, Hoebe RA, Scutigliani EM, Verhoeven J, Stap J, Bosch R, Rijpkema M, van Oven C, van Veen HA, Stellingwerf I, Vriend LEM, Marteijn JA, Aten JA, Krawczyk PM. Nucleic Acids Res. 2019 Sep 26;47(17):e100. doi: 10.1093/nar/gkz609. PubMed |
| Flow cytometry-based FRET identifies binding intensities in PPARgamma1 protein-protein interactions in living cells. Trumper V, von Knethen A, Preuss A, Ermilov E, Hackbarth S, Kuchler L, Gunne S, Schafer A, Bornhutter T, Vereb G, Ujlaky-Nagy L, Brune B, Roder B, Schindler M, Parnham MJ, Knape T. Theranostics. 2019 Jul 28;9(19):5444-5463. doi: 10.7150/thno.29367. eCollection 2019. PubMed |
Unintended perturbation of protein function using GFP nanobodies in human cells.
Kuey C, Larocque G, Clarke NI, Royle SJ.
J Cell Sci. 2019 Nov 6;132(21). pii: jcs.234955. doi: 10.1242/jcs.234955.
PubMed
Associated Plasmids |
| Optogenetic Control of Spine-Head JNK Reveals a Role in Dendritic Spine Regression. Hollos P, John JM, Lehtonen JV, Coffey ET. eNeuro. 2020 Feb 20;7(1). pii: ENEURO.0303-19.2019. doi: 10.1523/ENEURO.0303-19.2019. Print 2020 Jan/Feb. PubMed |
| Structural basis of astrocytic Ca(2+) signals at tripartite synapses. Arizono M, Inavalli VVGK, Panatier A, Pfeiffer T, Angibaud J, Levet F, Ter Veer MJT, Stobart J, Bellocchio L, Mikoshiba K, Marsicano G, Weber B, Oliet SHR, Nagerl UV. Nat Commun. 2020 Apr 20;11(1):1906. doi: 10.1038/s41467-020-15648-4. PubMed |
| A pH-responsive silica-metal-organic framework hybrid nanoparticle for the delivery of hydrophilic drugs, nucleic acids, and CRISPR-Cas9 genome-editing machineries. Wang Y, Shahi PK, Xie R, Zhang H, Abdeen AA, Yodsanit N, Ma Z, Saha K, Pattnaik BR, Gong S. J Control Release. 2020 Aug 10;324:194-203. doi: 10.1016/j.jconrel.2020.04.052. Epub 2020 May 5. PubMed |
| CRISPR Co-Editing Strategy for Scarless Homology-Directed Genome Editing. Reuven N, Adler J, Myers N, Shaul Y. Int J Mol Sci. 2021 Apr 3;22(7). pii: ijms22073741. doi: 10.3390/ijms22073741. PubMed |
| Oxygen-dependent changes in binding partners and post-translational modifications regulate the abundance and activity of HIF-1alpha/2alpha. Daly LA, Brownridge PJ, Batie M, Rocha S, See V, Eyers CE. Sci Signal. 2021 Jul 20;14(692). pii: 14/692/eabf6685. doi: 10.1126/scisignal.abf6685. PubMed |
| Metabolism of HSAN1- and T2DM-associated 1-deoxy-sphingolipids inhibits the migration of fibroblasts. Karsai G, Steiner R, Kaech A, Lone MA, von Eckardstein A, Hornemann T. J Lipid Res. 2021;62:100122. doi: 10.1016/j.jlr.2021.100122. Epub 2021 Sep 24. PubMed |
| Capillary morphogenesis gene 2 (CMG2) mediates growth factor-induced angiogenesis by regulating endothelial cell chemotaxis. Cryan LM, Tsang TM, Stiles J, Bazinet L, Lee SL, Garrard S, Madrian E, Roberts C, Payne J, Jensen A, Frankel AE, Ackroyd PC, Christensen KA, Rogers MS. Angiogenesis. 2022 Aug;25(3):397-410. doi: 10.1007/s10456-022-09833-w. Epub 2022 Feb 25. PubMed |
| Two-Photon Excitation Spectra of Various Fluorescent Proteins within a Broad Excitation Range. Leben R, Lindquist RL, Hauser AE, Niesner R, Rakhymzhan A. Int J Mol Sci. 2022 Nov 2;23(21):13407. doi: 10.3390/ijms232113407. PubMed |
| CD28-CAR-T cell activation through FYN kinase signaling rather than LCK enhances therapeutic performance. Wu L, Brzostek J, Sakthi Vale PD, Wei Q, Koh CKT, Ong JXH, Wu LZ, Tan JC, Chua YL, Yap J, Song Y, Tan VJY, Tan TYY, Lai J, MacAry PA, Gascoigne NRJ. Cell Rep Med. 2023 Feb 21;4(2):100917. doi: 10.1016/j.xcrm.2023.100917. Epub 2023 Jan 24. PubMed |
| Progesterone receptor membrane component 1 facilitates Ca(2+) signal amplification between endosomes and the endoplasmic reticulum. Gunaratne GS, Kumar S, Lin-Moshier Y, Slama JT, Brailoiu E, Patel S, Walseth TF, Marchant JS. J Biol Chem. 2023 Dec;299(12):105378. doi: 10.1016/j.jbc.2023.105378. Epub 2023 Oct 20. PubMed |
| Methylation‑sensitive restriction enzyme‑droplet digital PCR assay for the one‑step highly sensitive analysis of DNA methylation hotspots. Gattuso G, Lavoro A, Caltabiano R, Madonna G, Capone M, Ascierto PA, Falzone L, Libra M, Candido S. Int J Mol Med. 2024 May;53(5):42. doi: 10.3892/ijmm.2024.5366. Epub 2024 Mar 15. PubMed |
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