pcDNA3.1 MCS-BirA(R118G)-HA Citations (50)
Originally described in: A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells.Roux KJ, Kim DI, Raida M, Burke B J Cell Biol. 2012 Mar 12. PubMed Journal
Articles Citing pcDNA3.1 MCS-BirA(R118G)-HA
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| Probing nuclear pore complex architecture with proximity-dependent biotinylation. Kim DI, Birendra KC, Zhu W, Motamedchaboki K, Doye V, Roux KJ. Proc Natl Acad Sci U S A. 2014 Jun 17;111(24):E2453-61. doi: 10.1073/pnas.1406459111. Epub 2014 Jun 3. PubMed |
| Regulation of Latent Membrane Protein 1 Signaling through Interaction with Cytoskeletal Proteins. Holthusen K, Talaty P, Everly DN Jr. J Virol. 2015 Jul 15;89(14):7277-90. doi: 10.1128/JVI.00321-15. Epub 2015 May 6. PubMed |
| Cooperative and independent roles of the Drp1 adaptors Mff, MiD49 and MiD51 in mitochondrial fission. Osellame LD, Singh AP, Stroud DA, Palmer CS, Stojanovski D, Ramachandran R, Ryan MT. J Cell Sci. 2016 Jun 1;129(11):2170-81. doi: 10.1242/jcs.185165. Epub 2016 Apr 12. PubMed |
| Proximity Labeling Reveals Molecular Determinants of FGFR4 Endosomal Transport. Haugsten EM, Sorensen V, Kunova Bosakova M, de Souza GA, Krejci P, Wiedlocha A, Wesche J. J Proteome Res. 2016 Oct 7;15(10):3841-3855. Epub 2016 Sep 26. PubMed |
| EphA2 proteomics in human keratinocytes reveals a novel association with afadin and epidermal tight junctions. Perez White BE, Ventrella R, Kaplan N, Cable CJ, Thomas PM, Getsios S. J Cell Sci. 2017 Jan 1;130(1):111-118. doi: 10.1242/jcs.188169. Epub 2016 Nov 4. PubMed |
| Proximity-Dependent Biotinylation for Identification of Interacting Proteins. Le Sage V, Cinti A, Mouland AJ. Curr Protoc Cell Biol. 2016 Dec 1;73:17.19.1-17.19.12. doi: 10.1002/cpcb.11. PubMed |
| Novel regulatory roles of Mff and Drp1 in E3 ubiquitin ligase MARCH5-dependent degradation of MiD49 and Mcl1 and control of mitochondrial dynamics. Cherok E, Xu S, Li S, Das S, Meltzer WA, Zalzman M, Wang C, Karbowski M. Mol Biol Cell. 2016 Dec 8. pii: mbc.E16-04-0208. PubMed |
| Fatty acid synthase inhibits the O-GlcNAcase during oxidative stress. Groves JA, Maduka AO, O'Meally RN, Cole RN, Zachara NE. J Biol Chem. 2017 Apr 21;292(16):6493-6511. doi: 10.1074/jbc.M116.760785. Epub 2017 Feb 23. PubMed |
| The ER Stress Sensor PERK Coordinates ER-Plasma Membrane Contact Site Formation through Interaction with Filamin-A and F-Actin Remodeling. van Vliet AR, Giordano F, Gerlo S, Segura I, Van Eygen S, Molenberghs G, Rocha S, Houcine A, Derua R, Verfaillie T, Vangindertael J, De Keersmaecker H, Waelkens E, Tavernier J, Hofkens J, Annaert W, Carmeliet P, Samali A, Mizuno H, Agostinis P. Mol Cell. 2017 Mar 2;65(5):885-899.e6. doi: 10.1016/j.molcel.2017.01.020. Epub 2017 Feb 23. PubMed |
| The Protein Encoded by the CCDC170 Breast Cancer Gene Functions to Organize the Golgi-Microtubule Network. Jiang P, Li Y, Poleshko A, Medvedeva V, Baulina N, Zhang Y, Zhou Y, Slater CM, Pellegrin T, Wasserman J, Lindy M, Efimov A, Daly M, Katz RA, Chen X. EBioMedicine. 2017 Jun 27. pii: S2352-3964(17)30259-1. doi: 10.1016/j.ebiom.2017.06.024. PubMed |
| The basic tilted helix bundle domain of the prolyl isomerase FKBP25 is a novel double-stranded RNA binding module. Dilworth D, Upadhyay SK, Bonnafous P, Edoo AB, Bourbigot S, Pesek-Jardim F, Gudavicius G, Serpa JJ, Petrotchenko EV, Borchers CH, Nelson CJ, Mackereth CD. Nucleic Acids Res. 2017 Nov 16;45(20):11989-12004. doi: 10.1093/nar/gkx852. PubMed |
| Chaperone-Mediated Regulation of Choline Acetyltransferase Protein Stability and Activity by HSC/HSP70, HSP90, and p97/VCP. Morey TM, Winick-Ng W, Seah C, Rylett RJ. Front Mol Neurosci. 2017 Dec 12;10:415. doi: 10.3389/fnmol.2017.00415. eCollection 2017. PubMed |
| The interactome of EBV LMP1 evaluated by proximity-based BioID approach. Rider MA, Cheerathodi MR, Hurwitz SN, Nkosi D, Howell LA, Tremblay DC, Liu X, Zhu F, Meckes DG Jr. Virology. 2018 Mar;516:55-70. doi: 10.1016/j.virol.2017.12.033. Epub 2018 Jan 9. PubMed |
| Protein Tyrosine Phosphatase Receptor Type G (PTPRG) Controls Fibroblast Growth Factor Receptor (FGFR) 1 Activity and Influences Sensitivity to FGFR Kinase Inhibitors. Kostas M, Haugsten EM, Zhen Y, Sorensen V, Szybowska P, Fiorito E, Lorenz S, Jones N, de Souza GA, Wiedlocha A, Wesche J. Mol Cell Proteomics. 2018 May;17(5):850-870. doi: 10.1074/mcp.RA117.000538. Epub 2018 Jan 25. PubMed |
Versatile approach for functional analysis of human proteins and efficient stable cell line generation using FLP-mediated recombination system.
Szczesny RJ, Kowalska K, Klosowska-Kosicka K, Chlebowski A, Owczarek EP, Warkocki Z, Kulinski TM, Adamska D, Affek K, Jedroszkowiak A, Kotrys AV, Tomecki R, Krawczyk PS, Borowski LS, Dziembowski A.
PLoS One. 2018 Mar 28;13(3):e0194887. doi: 10.1371/journal.pone.0194887. eCollection 2018.
PubMed
Associated Plasmids |
| Ooplasmic flow cooperates with transport and anchorage in Drosophila oocyte posterior determination. Lu W, Lakonishok M, Serpinskaya AS, Kirchenbuechler D, Ling SC, Gelfand VI. J Cell Biol. 2018 Oct 1;217(10):3497-3511. doi: 10.1083/jcb.201709174. Epub 2018 Jul 23. PubMed |
| BioID: A Proximity-Dependent Labeling Approach in Proteomics Study. Li P, Meng Y, Wang L, Di LJ. Methods Mol Biol. 2019;1871:143-151. doi: 10.1007/978-1-4939-8814-3_10. PubMed |
| USP32 regulates late endosomal transport and recycling through deubiquitylation of Rab7. Sapmaz A, Berlin I, Bos E, Wijdeven RH, Janssen H, Konietzny R, Akkermans JJ, Erson-Bensan AE, Koning RI, Kessler BM, Neefjes J, Ovaa H. Nat Commun. 2019 Mar 29;10(1):1454. doi: 10.1038/s41467-019-09437-x. PubMed |
| Defining the NSD2 interactome: PARP1 PARylation reduces NSD2 histone methyltransferase activity and impedes chromatin binding. Huang X, LeDuc RD, Fornelli L, Schunter AJ, Bennett RL, Kelleher NL, Licht JD. J Biol Chem. 2019 Jun 27. pii: RA118.006159. doi: 10.1074/jbc.RA118.006159. PubMed |
| A Non-canonical Role of YAP/TEAD Is Required for Activation of Estrogen-Regulated Enhancers in Breast Cancer. Zhu C, Li L, Zhang Z, Bi M, Wang H, Su W, Hernandez K, Liu P, Chen J, Chen M, Huang TH, Chen L, Liu Z. Mol Cell. 2019 Aug 22;75(4):791-806.e8. doi: 10.1016/j.molcel.2019.06.010. Epub 2019 Jul 11. PubMed |
| Nuclear localization of Desmoplakin and its involvement in telomere maintenance. Li P, Meng Y, Wang Y, Li J, Lam M, Wang L, Di LJ. Int J Biol Sci. 2019 Aug 24;15(11):2350-2362. doi: 10.7150/ijbs.34450. eCollection 2019. PubMed |
| Lipocalin-2 Regulates Epidermal Growth Factor Receptor Intracellular Trafficking. Yammine L, Zablocki A, Baron W, Terzi F, Gallazzini M. Cell Rep. 2019 Nov 12;29(7):2067-2077.e6. doi: 10.1016/j.celrep.2019.10.015. PubMed |
| The interactome of the prostate-specific protein Anoctamin 7. Kaikkonen E, Takala A, Pursiheimo JP, Wahlstrom G, Schleutker J. Cancer Biomark. 2020;28(1):91-100. doi: 10.3233/CBM-190993. PubMed |
| Proteomic analysis of desmosomes reveals novel components required for epidermal integrity. Badu-Nkansah KA, Lechler T. Mol Biol Cell. 2020 May 15;31(11):1140-1153. doi: 10.1091/mbc.E19-09-0542. Epub 2020 Apr 2. PubMed |
| A proximity-labeling proteomic approach to investigate invadopodia molecular landscape in breast cancer cells. Thuault S, Mamelonet C, Salameh J, Ostacolo K, Chanez B, Salaun D, Baudelet E, Audebert S, Camoin L, Badache A. Sci Rep. 2020 Apr 22;10(1):6787. doi: 10.1038/s41598-020-63926-4. PubMed |
| Proximal Biotinylation-Based Combinatory Approach for Isolating Integral Plasma Membrane Proteins. Akdag M, Yunt ZS, Kamacioglu A, Qureshi MH, Akarlar BA, Ozlu N. J Proteome Res. 2020 Aug 7;19(8):3583-3592. doi: 10.1021/acs.jproteome.0c00113. Epub 2020 Jun 15. PubMed |
| MCM8IP activates the MCM8-9 helicase to promote DNA synthesis and homologous recombination upon DNA damage. Huang JW, Acharya A, Taglialatela A, Nambiar TS, Cuella-Martin R, Leuzzi G, Hayward SB, Joseph SA, Brunette GJ, Anand R, Soni RK, Clark NL, Bernstein KA, Cejka P, Ciccia A. Nat Commun. 2020 Jun 11;11(1):2948. doi: 10.1038/s41467-020-16718-3. PubMed |
| TMEM16K is an interorganelle regulator of endosomal sorting. Petkovic M, Oses-Prieto J, Burlingame A, Jan LY, Jan YN. Nat Commun. 2020 Jul 3;11(1):3298. doi: 10.1038/s41467-020-17016-8. PubMed |
| Disclosing the Interactome of Leukemogenic NUP98-HOXA9 and SET-NUP214 Fusion Proteins Using a Proteomic Approach. Mendes A, Juhlen R, Bousbata S, Fahrenkrog B. Cells. 2020 Jul 10;9(7). pii: cells9071666. doi: 10.3390/cells9071666. PubMed |
| Splicing variation of BMP2K balances abundance of COPII assemblies and autophagic degradation in erythroid cells. Cendrowski J, Kaczmarek M, Mazur M, Kuzmicz-Kowalska K, Jastrzebski K, Brewinska-Olchowik M, Kominek A, Piwocka K, Miaczynska M. Elife. 2020 Aug 14;9. pii: 58504. doi: 10.7554/eLife.58504. PubMed |
| RNF43 truncations trap CK1 to drive niche-independent self-renewal in cancer. Spit M, Fenderico N, Jordens I, Radaszkiewicz T, Lindeboom RG, Bugter JM, Cristobal A, Ootes L, van Osch M, Janssen E, Boonekamp KE, Hanakova K, Potesil D, Zdrahal Z, Boj SF, Medema JP, Bryja V, Koo BK, Vermeulen M, Maurice MM. EMBO J. 2020 Sep 15;39(18):e103932. doi: 10.15252/embj.2019103932. Epub 2020 Aug 10. PubMed |
| Proximity-dependent Proteomics Reveals Extensive Interactions of Protocadherin-19 with Regulators of Rho GTPases and the Microtubule Cytoskeleton. Emond MR, Biswas S, Morrow ML, Jontes JD. Neuroscience. 2021 Jan 1;452:26-36. doi: 10.1016/j.neuroscience.2020.09.033. Epub 2020 Oct 1. PubMed |
| Impaired flickering of the permeability transition pore causes SPG7 spastic paraplegia. Sambri I, Massa F, Gullo F, Meneghini S, Cassina L, Carraro M, Dina G, Quattrini A, Patanella L, Carissimo A, Iuliano A, Santorelli F, Codazzi F, Grohovaz F, Bernardi P, Becchetti A, Casari G. EBioMedicine. 2020 Nov;61:103050. doi: 10.1016/j.ebiom.2020.103050. Epub 2020 Oct 9. PubMed |
| Proximity-Dependent Biotinylation (BioID) of Integrin Interaction Partners. Myllymaki SM, Liu X, Varjosalo M, Manninen A. Methods Mol Biol. 2021;2217:57-69. doi: 10.1007/978-1-0716-0962-0_6. PubMed |
| Identification of pannexin 1-regulated genes, interactome, and pathways in rhabdomyosarcoma and its tumor inhibitory interaction with AHNAK. Xiang X, Langlois S, St-Pierre ME, Blinder A, Charron P, Graber TE, Fowler SL, Baird SD, Bennett SAL, Alain T, Cowan KN. Oncogene. 2021 Mar;40(10):1868-1883. doi: 10.1038/s41388-020-01623-2. Epub 2021 Feb 9. PubMed |
| Interactome Mapping of eIF3A in a Colon Cancer and an Immortalized Embryonic Cell Line Using Proximity-Dependent Biotin Identification. Vo DK, Engler A, Stoimenovski D, Hartig R, Kaehne T, Kalinski T, Naumann M, Haybaeck J, Nass N. Cancers (Basel). 2021 Mar 14;13(6). pii: cancers13061293. doi: 10.3390/cancers13061293. PubMed |
| RTEL1 influences the abundance and localization of TERRA RNA. Ghisays F, Garzia A, Wang H, Canasto-Chibuque C, Hohl M, Savage SA, Tuschl T, Petrini JHJ. Nat Commun. 2021 May 21;12(1):3016. doi: 10.1038/s41467-021-23299-2. PubMed |
| Fucosylated Proteome Profiling Identifies a Fucosylated, Non-Ribosomal, Stress-Responsive Species of Ribosomal Protein S3. Watson G, Lester D, Ren H, Forsyth CM, Medina E, Gonzalez Perez D, Darville L, Yao J, Luca V, Koomen J, Cen L, Lau E. Cells. 2021 May 25;10(6). pii: cells10061310. doi: 10.3390/cells10061310. PubMed |
| Nestin Is Required for Spindle Assembly and Cell-Cycle Progression in Glioblastoma Cells. Wang Q, Wu H, Hu J, Fu H, Qu Y, Yang Y, Cai KQ, Efimov A, Wu M, Yen T, Wang Y, Yang ZJ. Mol Cancer Res. 2021 Oct;19(10):1651-1665. doi: 10.1158/1541-7786.MCR-20-0994. Epub 2021 Jun 22. PubMed |
| Proximity-Dependent Biotinylation to Elucidate the Interactome of TNK2 Nonreceptor Tyrosine Kinase. Tahir R, Madugundu AK, Udainiya S, Cutler JA, Renuse S, Wang L, Pearson NA, Mitchell CJ, Mahajan N, Pandey A, Wu X. J Proteome Res. 2021 Sep 3;20(9):4566-4577. doi: 10.1021/acs.jproteome.1c00551. Epub 2021 Aug 24. PubMed |
| Lipin 1 modulates mRNA splicing during fasting adaptation in liver. Wang H, Chan TW, Vashisht AA, Drew BG, Calkin AC, Harris TE, Wohlschlegel JA, Xiao X, Reue K. JCI Insight. 2021 Sep 8;6(17). pii: e150114. doi: 10.1172/jci.insight.150114. PubMed |
| GRASP55 restricts early-stage autophagy and regulates spatial organization of the early secretory network. Liu JY, Lin YT, Leidal AM, Huang HH, Ye J, Wiita AP, Debnath J. Biol Open. 2021 Oct 15;10(10). pii: 272216. doi: 10.1242/bio.058736. Epub 2021 Oct 12. PubMed |
| Rab11-FIP1 and Rab11-FIP5 Regulate pIgR/pIgA Transcytosis through TRIM21-Mediated Polyubiquitination. Fan X, Zhou D, Zhao B, Sha H, Li M, Li X, Yang J, Yan H. Int J Mol Sci. 2021 Sep 28;22(19). pii: ijms221910466. doi: 10.3390/ijms221910466. PubMed |
| RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy. Radaszkiewicz T, Noskova M, Gomoryova K, Vondalova Blanarova O, Radaszkiewicz KA, Pickova M, Vichova R, Gybel T, Kaiser K, Demkova L, Kucerova L, Barta T, Potesil D, Zdrahal Z, Soucek K, Bryja V. Elife. 2021 Oct 27;10. pii: 65759. doi: 10.7554/eLife.65759. PubMed |
| iASPP contributes to cell cortex rigidity, mitotic cell rounding, and spindle positioning. Mangon A, Salaun D, Bouali ML, Kuzmic M, Quitard S, Thuault S, Isnardon D, Audebert S, Puech PH, Verdier-Pinard P, Badache A. J Cell Biol. 2021 Dec 6;220(12). pii: 212730. doi: 10.1083/jcb.202012002. Epub 2021 Oct 27. PubMed |
| PDIA3/ERp57 promotes a matrix-rich secretome that stimulates fibroblast adhesion through CCN2. Hellewell AL, Heesom KJ, Jepson MA, Adams JC. Am J Physiol Cell Physiol. 2022 Apr 1;322(4):C624-C644. doi: 10.1152/ajpcell.00258.2021. Epub 2022 Feb 23. PubMed |
| Cytomegalovirus US28 regulates cellular EphA2 to maintain viral latency. Wass AB, Krishna BA, Herring LE, Gilbert TSK, Nukui M, Groves IJ, Dooley AL, Kulp KH, Matthews SM, Rotroff DM, Graves LM, O'Connor CM. Sci Adv. 2022 Oct 28;8(43):eadd1168. doi: 10.1126/sciadv.add1168. Epub 2022 Oct 26. PubMed |
| Cell cycle-dependent palmitoylation of protocadherin 7 by ZDHHC5 promotes successful cytokinesis. Ozkan NE, Yigit BN, Degirmenci BS, Qureshi MH, Yapici GN, Kamacioglu A, Bavili N, Kiraz A, Ozlu N. J Cell Sci. 2023 Mar 15;136(6):jcs260266. doi: 10.1242/jcs.260266. Epub 2023 Mar 20. PubMed |
Myosin-X recruits lamellipodin to filopodia tips.
Popovic A, Miihkinen M, Ghimire S, Saup R, Gronloh MLB, Ball NJ, Goult BT, Ivaska J, Jacquemet G.
J Cell Sci. 2023 Mar 1;136(5):jcs260574. doi: 10.1242/jcs.260574. Epub 2023 Mar 2.
PubMed
Associated Plasmids |
| Metabolic modulation of CtBP dimeric status impacts the repression of DNA damage repair genes and the platinum sensitivity of ovarian cancer. Li J, Wang Y, Wang L, Hao D, Li P, Su M, Zhao Z, Liu T, Tai L, Lu J, Di LJ. Int J Biol Sci. 2023 Apr 9;19(7):2081-2096. doi: 10.7150/ijbs.80952. eCollection 2023. PubMed |
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