piRFP Citations (37)
Originally described in: Bright and stable near-infrared fluorescent protein for in vivo imaging.Filonov GS, Piatkevich KD, Ting LM, Zhang J, Kim K, Verkhusha VV Nat Biotechnol. 2011 Jul 17. doi: 10.1038/nbt.1918. PubMed Journal
Articles Citing piRFP
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Optogenetic control of phosphoinositide metabolism.
Idevall-Hagren O, Dickson EJ, Hille B, Toomre DK, De Camilli P.
Proc Natl Acad Sci U S A. 2012 Aug 28;109(35):E2316-23. doi: 10.1073/pnas.1211305109. Epub 2012 Jul 30.
PubMed
Associated Plasmids |
| Specialized filopodia direct long-range transport of SHH during vertebrate tissue patterning. Sanders TA, Llagostera E, Barna M. Nature. 2013 May 30;497(7451):628-32. doi: 10.1038/nature12157. Epub 2013 Apr 28. PubMed |
Novel fluorescent genome editing reporters for monitoring DNA repair pathway utilization at endonuclease-induced breaks.
Kuhar R, Gwiazda KS, Humbert O, Mandt T, Pangallo J, Brault M, Khan I, Maizels N, Rawlings DJ, Scharenberg AM, Certo MT.
Nucleic Acids Res. 2013 Oct 10.
PubMed
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| iRFP is a sensitive marker for cell number and tumor growth in high-throughput systems. Hock AK, Lee P, Maddocks OD, Mason SM, Blyth K, Vousden KH. Cell Cycle. 2014;13(2):220-6. doi: 10.4161/cc.26985. Epub 2013 Oct 31. PubMed |
| Inter-cellular exchange of cellular components via VE-cadherin-dependent trans-endocytosis. Sakurai T, Woolls MJ, Jin SW, Murakami M, Simons M. PLoS One. 2014 Mar 6;9(6):e90736. doi: 10.1371/journal.pone.0090736. eCollection 2014. PubMed |
| Assessing in vitro stem-cell function and tracking engraftment of stem cells in ischaemic hearts by using novel iRFP gene labelling. Wang Y, Zhou M, Wang X, Qin G, Weintraub NL, Tang Y. J Cell Mol Med. 2014 Sep;18(9):1889-94. doi: 10.1111/jcmm.12321. Epub 2014 Jun 9. PubMed |
| Indocyanine green-loaded nanoparticles for image-guided tumor surgery. Hill TK, Abdulahad A, Kelkar SS, Marini FC, Long TE, Provenzale JM, Mohs AM. Bioconjug Chem. 2015 Feb 18;26(2):294-303. doi: 10.1021/bc5005679. Epub 2015 Jan 16. PubMed |
| Rapid parallel measurements of macroautophagy and mitophagy in mammalian cells using a single fluorescent biosensor. Sargsyan A, Cai J, Fandino LB, Labasky ME, Forostyan T, Colosimo LK, Thompson SJ, Graham TE. Sci Rep. 2015 Jul 28;5:12397. doi: 10.1038/srep12397. PubMed |
| High affinity receptor labeling based on basic leucine zipper domain peptides conjugated with pH-sensitive fluorescent dye: Visualization of AMPA-type glutamate receptor endocytosis in living neurons. Hayashi A, Asanuma D, Kamiya M, Urano Y, Okabe S. Neuropharmacology. 2016 Jan;100:66-75. doi: 10.1016/j.neuropharm.2015.07.026. Epub 2015 Jul 26. PubMed |
| Optimisations and Challenges Involved in the Creation of Various Bioluminescent and Fluorescent Influenza A Virus Strains for In Vitro and In Vivo Applications. Spronken MI, Short KR, Herfst S, Bestebroer TM, Vaes VP, van der Hoeven B, Koster AJ, Kremers GJ, Scott DP, Gultyaev AP, Sorell EM, de Graaf M, Barcena M, Rimmelzwaan GF, Fouchier RA. PLoS One. 2015 Aug 4;10(8):e0133888. doi: 10.1371/journal.pone.0133888. eCollection 2015. PubMed |
| Zinc regulates a key transcriptional pathway for epileptogenesis via metal-regulatory transcription factor 1. van Loo KM, Schaub C, Pitsch J, Kulbida R, Opitz T, Ekstein D, Dalal A, Urbach H, Beck H, Yaari Y, Schoch S, Becker AJ. Nat Commun. 2015 Oct 26;6:8688. doi: 10.1038/ncomms9688. PubMed |
| Frequency and amplitude control of cortical oscillations by phosphoinositide waves. Xiong D, Xiao S, Guo S, Lin Q, Nakatsu F, Wu M. Nat Chem Biol. 2016 Mar;12(3):159-66. doi: 10.1038/nchembio.2000. Epub 2016 Jan 11. PubMed |
| Interaction of RNA with a C-terminal fragment of the amyotrophic lateral sclerosis-associated TDP43 reduces cytotoxicity. Kitamura A, Nakayama Y, Shibasaki A, Taki A, Yuno S, Takeda K, Yahara M, Tanabe N, Kinjo M. Sci Rep. 2016 Jan 13;6:19230. doi: 10.1038/srep19230. PubMed |
| Using Dual Fluorescence Reporting Genes to Establish an In Vivo Imaging Model of Orthotopic Lung Adenocarcinoma in Mice. Lai CW, Chen HL, Yen CC, Wang JL, Yang SH, Chen CM. Mol Imaging Biol. 2016 May 19. PubMed |
Near-infrared fluorescent protein iRFP713 as a reporter protein for optogenetic vectors, a transgenic Cre-reporter rat, and other neuronal studies.
Richie CT, Whitaker LR, Whitaker KW, Necarsulmer J, Baldwin HA, Zhang Y, Fortuno L, Hinkle JJ, Koivula P, Henderson MJ, Sun W, Wang K, Smith JC, Pickel J, Ji N, Hope BT, Harvey BK.
J Neurosci Methods. 2017 Jun 1;284:1-14. doi: 10.1016/j.jneumeth.2017.03.020. Epub 2017 Apr 2.
PubMed
Associated Plasmids |
| Development of an inducible mouse model of iRFP713 to track recombinase activity and tumour development in vivo. Hock AK, Cheung EC, Humpton TJ, Monteverde T, Paulus-Hock V, Lee P, McGhee E, Scopelliti A, Murphy DJ, Strathdee D, Blyth K, Vousden KH. Sci Rep. 2017 May 12;7(1):1837. doi: 10.1038/s41598-017-01741-0. PubMed |
Real-time observation of light-controlled transcription in living cells.
Rademacher A, Erdel F, Trojanowski J, Schumacher S, Rippe K.
J Cell Sci. 2017 Dec 15;130(24):4213-4224. doi: 10.1242/jcs.205534. Epub 2017 Nov 9.
PubMed
Associated Plasmids |
| Molecular barcoding of viral vectors enables mapping and optimization of mRNA trans-splicing. Davidsson M, Diaz-Fernandez P, Torroba M, Schwich OD, Aldrin-Kirk P, Quintino L, Heuer A, Wang G, Lundberg C, Bjorklund T. RNA. 2018 May;24(5):673-687. doi: 10.1261/rna.063925.117. Epub 2018 Jan 31. PubMed |
| A Split Transcriptional Repressor That Links Protein Solubility to an Orthogonal Genetic Circuit. Zeng Y, Jones AM, Thomas EE, Nassif B, Silberg JJ, Segatori L. ACS Synth Biol. 2018 Sep 21;7(9):2126-2138. doi: 10.1021/acssynbio.8b00129. Epub 2018 Aug 23. PubMed |
| Extracellular galectin-3 facilitates colon cancer cell migration and is related to the epidermal growth factor receptor. Wu KL, Kuo CM, Huang EY, Pan HM, Huang CC, Chen YF, Hsiao CC, Yang KD. Am J Transl Res. 2018 Aug 15;10(8):2402-2412. eCollection 2018. PubMed |
| A dual Ucp1 reporter mouse model for imaging and quantitation of brown and brite fat recruitment. Wang H, Willershauser M, Karlas A, Gorpas D, Reber J, Ntziachristos V, Maurer S, Fromme T, Li Y, Klingenspor M. Mol Metab. 2019 Feb;20:14-27. doi: 10.1016/j.molmet.2018.11.009. Epub 2018 Nov 28. PubMed |
Targeted Transgene Activation in the Brain Tissue by Systemic Delivery of Engineered AAV1 Expressing CRISPRa.
Lau CH, Ho JW, Lo PK, Tin C.
Mol Ther Nucleic Acids. 2019 Jun 7;16:637-649. doi: 10.1016/j.omtn.2019.04.015. Epub 2019 Apr 23.
PubMed
Associated Plasmids |
| Spatiotemporal dissection of the trans-Golgi network in budding yeast. Tojima T, Suda Y, Ishii M, Kurokawa K, Nakano A. J Cell Sci. 2019 Aug 2;132(15). pii: jcs.231159. doi: 10.1242/jcs.231159. PubMed |
| Bilirubin Links Heme Metabolism to Neuroprotection by Scavenging Superoxide. Vasavda C, Kothari R, Malla AP, Tokhunts R, Lin A, Ji M, Ricco C, Xu R, Saavedra HG, Sbodio JI, Snowman AM, Albacarys L, Hester L, Sedlak TW, Paul BD, Snyder SH. Cell Chem Biol. 2019 Oct 17;26(10):1450-1460.e7. doi: 10.1016/j.chembiol.2019.07.006. Epub 2019 Jul 25. PubMed |
| Bone Morphogenetic Protein 4 Gene Therapy in Mice Inhibits Myeloma Tumor Growth, But Has a Negative Impact on Bone. Westhrin M, Holien T, Zahoor M, Moen SH, Buene G, Stordal B, Hella H, Yuan H, de Bruijn JD, Martens A, Groen RW, Bosch F, Smith U, Sponaas AM, Sundan A, Standal T. JBMR Plus. 2019 Nov 22;4(1):e10247. doi: 10.1002/jbm4.10247. eCollection 2020 Jan. PubMed |
| Recycling endosomes attach to the trans-side of Golgi stacks in Drosophila and mammalian cells. Fujii S, Kurokawa K, Inaba R, Hiramatsu N, Tago T, Nakamura Y, Nakano A, Satoh T, Satoh AK. J Cell Sci. 2020 Feb 26;133(4):jcs236935. doi: 10.1242/jcs.236935. PubMed |
Spatiotemporal control of phosphatidic acid signaling with optogenetic, engineered phospholipase Ds.
Tei R, Baskin JM.
J Cell Biol. 2020 Mar 2;219(3). pii: 133675. doi: 10.1083/jcb.201907013.
PubMed
Associated Plasmids |
| Combined nanomedicines targeting colorectal cancer stem cells and cancer cells. Tsakiris N, Fauvet F, Ruby S, Puisieux A, Paquot A, Muccioli GG, Vigneron AM, Preat V. J Control Release. 2020 Jul 21;326:387-395. doi: 10.1016/j.jconrel.2020.07.025. PubMed |
| Bovine mammary alveolar MAC-T cells afford a tool for studies of bovine milk exosomes in drug delivery. Ogunnaike M, Wang H, Zempleni J. Int J Pharm. 2021 Dec 15;610:121263. doi: 10.1016/j.ijpharm.2021.121263. Epub 2021 Nov 4. PubMed |
| Intracellular IL-32 regulates mitochondrial metabolism, proliferation, and differentiation of malignant plasma cells. Aass KR, Mjelle R, Kastnes MH, Tryggestad SS, van den Brink LM, Aass Roseth I, Westhrin M, Zahoor M, Moen SH, Vikene Nedal TM, Buene G, Misund K, Sponaas AM, Ma Q, Sundan A, Groen RW, Slordahl TS, Waage A, Standal T. iScience. 2021 Dec 13;25(1):103605. doi: 10.1016/j.isci.2021.103605. eCollection 2022 Jan 21. PubMed |
| KIT D816V is dimerization-independent and activates downstream pathways frequently perturbed in mastocytosis. Rajan V, Prykhozhij SV, Pandey A, Cohen AM, Rainey JK, Berman JN. Br J Haematol. 2022 Mar 4. doi: 10.1111/bjh.18116. PubMed |
| Combined analysis of T cell activation and T cell-mediated cytotoxicity by imaging cytometry. Chanda MK, Shudde CE, Piper TL, Zheng Y, Courtney AH. J Immunol Methods. 2022 Jul;506:113290. doi: 10.1016/j.jim.2022.113290. Epub 2022 May 27. PubMed |
| Nuclear fascin regulates cancer cell survival. Lawson CD, Peel S, Jayo A, Corrigan A, Iyer P, Baxter Dalrymple M, Marsh RJ, Cox S, Van Audenhove I, Gettemans J, Parsons M. Elife. 2022 Aug 30;11:e79283. doi: 10.7554/eLife.79283. PubMed |
| Super-Resolution Live Imaging of Cargo Traffic Through the Golgi Apparatus in Mammalian Cells. Tojima T, Miyashiro D, Kosugi Y, Nakano A. Methods Mol Biol. 2023;2557:127-140. doi: 10.1007/978-1-0716-2639-9_10. PubMed |
Chemogenetic regulation of the TARP-lipid interaction mimics LTP and reversibly modifies behavior.
Park J, Berthoux C, Hoyos-Ramirez E, Shan L, Morimoto-Tomita M, Wang Y, Castillo PE, Tomita S.
Cell Rep. 2023 Aug 29;42(8):112826. doi: 10.1016/j.celrep.2023.112826. Epub 2023 Jul 19.
PubMed
Associated Plasmids |
| Inhibition of orthotopic castration-resistant prostate cancer growth and metastasis in mice by JC VLPs carrying a suicide gene driven by the PSA promoter. Chou CC, Tseng CE, Lin YS, Wang M, Chen PL, Chang D, Shen CH, Fang CY. Cancer Gene Ther. 2024 Feb;31(2):250-258. doi: 10.1038/s41417-023-00699-8. Epub 2023 Dec 11. PubMed |
| Spatiotemporal dissection of the Golgi apparatus and the ER-Golgi intermediate compartment in budding yeast. Tojima T, Suda Y, Jin N, Kurokawa K, Nakano A. Elife. 2024 Mar 19;13:e92900. doi: 10.7554/eLife.92900. PubMed |
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