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PurposePlasmid for IPTG-inducible expression and purification of protein A/G-Hia5-6xHis (pAG-Hia5) for antibody directed DNA (adenine) methylation (as in DiMeLo-seq)
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Depositing Lab
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Sequence Information
Ordering
Item | Catalog # | Description | Quantity | Price (USD) | |
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Plasmid | 174373 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $85 |
Backbone
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Vector backbonepET
- Total vector size (bp) 6741
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Vector typeBacterial Expression
Growth in Bacteria
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Bacterial Resistance(s)Kanamycin, 50 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Growth instructionsFor protein expression, use T7 Express lysY competent E. coli cells (NEB #C3010I) See protocol: dx.doi.org/10.17504/protocols.io.bv82n9ye
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Copy numberUnknown
Gene/Insert
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Gene/Insert nameprotein AG - hia5
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Insert Size (bp)1500
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Tags
/ Fusion Proteins
- Protein A/G (N terminal on insert)
- 6xHis (C terminal on backbone)
Resource Information
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Addgene Notes
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
Protocol for purification and expression can be found at: dx.doi.org/10.17504/protocols.io.bv82n9ye
Application for DiMeLo-seq is described in: doi.org/10.1101/2021.07.06.451383
Protocol was adapted and modified from: doi.org/10.1126/science.aaz1646
This plasmid has been observed to occur in our stock as a plasmid dimer. Dimerization often does not impact plasmid function, but may reduce transformation and transfection efficiencies. You may need to screen multiple colonies to isolate the monomeric version of this plasmid. If you still have trouble isolating the monomeric version, you might consider linearizing, gel extracting, re-ligating, and transforming the plasmid in a recombinase-deficient strain.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
pET-pAG-Hia5 was a gift from Aaron Straight (Addgene plasmid # 174373 ; http://n2t.net/addgene:174373 ; RRID:Addgene_174373) -
For your References section:
DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome wide. Altemose N, Maslan A, Smith OK, Sundararajan K, Brown RR, Mishra R, Detweiler AM, Neff N, Miga KH, Straight AF, Streets A. Nat Methods. 2022 Jun;19(6):711-723. doi: 10.1038/s41592-022-01475-6. Epub 2022 Apr 8. 10.1038/s41592-022-01475-6 PubMed 35396487