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PurposeN-terminal component of OptoShroom3 optogenetic tool. Binds to apical junctions. pDONRp5-p2 plasmid.
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Depositing Lab
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Sequence Information
Ordering
Item | Catalog # | Description | Quantity | Price (USD) | |
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Plasmid | 170976 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $85 |
Backbone
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Vector backbonepDONR221 p5-p2
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Backbone manufacturerInvitrogen
- Backbone size w/o insert (bp) 2553
- Total vector size (bp) 8070
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Vector typeGateway cloning
Growth in Bacteria
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Bacterial Resistance(s)Kanamycin, 50 μg/mL
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Growth Temperature37°C
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Growth Strain(s)DH5alpha
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Copy numberLow Copy
Gene/Insert
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Gene/Insert nameNShroom3
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SpeciesM. musculus (mouse)
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Insert Size (bp)4161
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MutationFrom isoform 2, deleted amino acids 1389 - 1805, mutations: G1226E, E1227K, P1242L, R1276L
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GenBank IDXP_006535031.1
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Entrez GeneShroom3 (a.k.a. AL022960, D5Ertd287, D5Ertd287e, Sh, Shr, Shrm, Shrm3)
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Tags
/ Fusion Proteins
- eGFP (N terminal on insert)
- iLID (C terminal on insert)
Cloning Information
- Cloning method Gateway Cloning
- 5′ sequencing primer M13 fwd: GTAAAACGACGGCCAGT
- 3′ sequencing primer M13 rev: GTCATAGCTGTTTCCTG (Common Sequencing Primers)
Resource Information
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Supplemental Documents
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A portion of this plasmid was derived from a plasmid made byOriginal mShroom3 sequence was a gift from T. Nishimura, from M.Takeichi lab. iLID sequence was a gift from H. Janovjak lab.
Terms and Licenses
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Academic/Nonprofit Terms
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Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
Depositor Comments
Please visit https://doi.org/10.1101/2021.04.20.440475 for bioRxiv preprint.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
pDONRp5-p2 GFP-NShroom3-iLID was a gift from Miki Ebisuya (Addgene plasmid # 170976 ; http://n2t.net/addgene:170976 ; RRID:Addgene_170976) -
For your References section:
Optogenetic control of apical constriction induces synthetic morphogenesis in mammalian tissues. Martinez-Ara G, Taberner N, Takayama M, Sandaltzopoulou E, Villava CE, Bosch-Padros M, Takata N, Trepat X, Eiraku M, Ebisuya M. Nat Commun. 2022 Sep 14;13(1):5400. doi: 10.1038/s41467-022-33115-0. 10.1038/s41467-022-33115-0 PubMed 36104355