pAG/MNase Citations (15)

Originally described in: Improved CUT&RUN chromatin profiling tools.
Meers MP, Bryson TD, Henikoff JG, Henikoff S Elife. 2019 Jun 24;8. pii: 46314. doi: 10.7554/eLife.46314. PubMed Journal

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Articles Citing pAG/MNase

Articles
Nuclear receptor Ftz-f1 promotes follicle maturation and ovulation partly via bHLH/PAS transcription factor Sim. Knapp EM, Li W, Singh V, Sun J. Elife. 2020 Apr 27;9. pii: 54568. doi: 10.7554/eLife.54568. PubMed
The Polycomb group protein Ring1 regulates dorsoventral patterning of the mouse telencephalon. Eto H, Kishi Y, Yakushiji-Kaminatsui N, Sugishita H, Utsunomiya S, Koseki H, Gotoh Y. Nat Commun. 2020 Nov 11;11(1):5709. doi: 10.1038/s41467-020-19556-5. PubMed
A functional map of genomic HIF1alpha-DNA complexes in the eye lens revealed through multiomics analysis. Disatham J, Brennan L, Chauss D, Kantorow J, Afzali B, Kantorow M. BMC Genomics. 2021 Jul 3;22(1):497. doi: 10.1186/s12864-021-07795-9. PubMed
Variant PCGF1-PRC1 links PRC2 recruitment with differentiation-associated transcriptional inactivation at target genes. Sugishita H, Kondo T, Ito S, Nakayama M, Yakushiji-Kaminatsui N, Kawakami E, Koseki Y, Ohinata Y, Sharif J, Harachi M, Blackledge NP, Klose RJ, Koseki H. Nat Commun. 2021 Sep 9;12(1):5341. doi: 10.1038/s41467-021-24894-z. PubMed
Autocrine vitamin D signaling switches off pro-inflammatory programs of TH1 cells. Chauss D, Freiwald T, McGregor R, Yan B, Wang L, Nova-Lamperti E, Kumar D, Zhang Z, Teague H, West EE, Vannella KM, Ramos-Benitez MJ, Bibby J, Kelly A, Malik A, Freeman AF, Schwartz DM, Portilla D, Chertow DS, John S, Lavender P, Kemper C, Lombardi G, Mehta NN, Cooper N, Lionakis MS, Laurence A, Kazemian M, Afzali B. Nat Immunol. 2022 Jan;23(1):62-74. doi: 10.1038/s41590-021-01080-3. Epub 2021 Nov 11. PubMed
DiMeLo-seq: a long-read, single-molecule method for mapping protein-DNA interactions genome wide. Altemose N, Maslan A, Smith OK, Sundararajan K, Brown RR, Mishra R, Detweiler AM, Neff N, Miga KH, Straight AF, Streets A. Nat Methods. 2022 Jun;19(6):711-723. doi: 10.1038/s41592-022-01475-6. Epub 2022 Apr 8. PubMed Associated Plasmids pET-pA-Hia5 pET-pAG-Hia5 prhaBAD-pA-Hia5
TFAP2 paralogs facilitate chromatin access for MITF at pigmentation and cell proliferation genes. Kenny C, Dilshat R, Seberg HE, Van Otterloo E, Bonde G, Helverson A, Franke CM, Steingrimsson E, Cornell RA. PLoS Genet. 2022 May 17;18(5):e1010207. doi: 10.1371/journal.pgen.1010207. eCollection 2022 May. PubMed
H3-K27M-mutant nucleosomes interact with MLL1 to shape the glioma epigenetic landscape. Furth N, Algranati D, Dassa B, Beresh O, Fedyuk V, Morris N, Kasper LH, Jones D, Monje M, Baker SJ, Shema E. Cell Rep. 2022 May 17;39(7):110836. doi: 10.1016/j.celrep.2022.110836. PubMed
cBAF complex components and MYC cooperate early in CD8(+) T cell fate. Guo A, Huang H, Zhu Z, Chen MJ, Shi H, Yuan S, Sharma P, Connelly JP, Liedmann S, Dhungana Y, Li Z, Haydar D, Yang M, Beere H, Yustein JT, DeRenzo C, Pruett-Miller SM, Crawford JC, Krenciute G, Roberts CWM, Chi H, Green DR. Nature. 2022 Jul;607(7917):135-141. doi: 10.1038/s41586-022-04849-0. Epub 2022 Jun 22. PubMed
CTCF mediates CD8+ effector differentiation through dynamic redistribution and genomic reorganization. Liu J, Zhu S, Hu W, Zhao X, Shan Q, Peng W, Xue HH. J Exp Med. 2023 Apr 3;220(4):e20221288. doi: 10.1084/jem.20221288. Epub 2023 Feb 8. PubMed
Nanoparticle-mediated targeting of the fusion gene RUNX1/ETO in t(8;21)-positive acute myeloid leukaemia. Issa H, Swart LE, Rasouli M, Ashtiani M, Nakjang S, Jyotsana N, Schuschel K, Heuser M, Blair H, Heidenreich O. Leukemia. 2023 Apr;37(4):820-834. doi: 10.1038/s41375-023-01854-8. Epub 2023 Feb 23. PubMed
Hybridization led to a rewired pluripotency network in the allotetraploid Xenopus laevis. Phelps WA, Hurton MD, Ayers TN, Carlson AE, Rosenbaum JC, Lee MT. Elife. 2023 Oct 3;12:e83952. doi: 10.7554/eLife.83952. PubMed
Profiling of RNA-binding protein binding sites by in situ reverse transcription-based sequencing. Xiao Y, Chen YM, Zou Z, Ye C, Dou X, Wu J, Liu C, Liu S, Yan H, Wang P, Zeng TB, Liu Q, Fei J, Tang W, He C. Nat Methods. 2024 Jan 10. doi: 10.1038/s41592-023-02146-w. PubMed Associated Plasmids His6-pAG-RTase
Exhaustive identification of genome-wide binding events of transcriptional regulators. Nordin A, Pagella P, Zambanini G, Cantu C. Nucleic Acids Res. 2024 Apr 24;52(7):e40. doi: 10.1093/nar/gkae180. PubMed
Heterochromatic 3D genome organization is directed by HP1a- and H3K9-dependent and independent mechanisms. Stutzman AV, Hill CA, Armstrong RL, Gohil R, Duronio RJ, Dowen JM, McKay DJ. Mol Cell. 2024 Jun 6;84(11):2017-2035.e6. doi: 10.1016/j.molcel.2024.05.002. Epub 2024 May 24. PubMed

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