pPtGE35
(Plasmid
#107999)
-
PurposeExpresses TevCas9 in Phaeodactylum tricornutum / Encodes elements required for conjugation
-
Depositing Lab
-
Sequence Information
Ordering
Item | Catalog # | Description | Quantity | Price (USD) | |
---|---|---|---|---|---|
Plasmid | 107999 | Standard format: Plasmid sent in bacteria as agar stab | 1 | $85 |
Backbone
-
Vector backbonepKS diaCas9_sgRNA
-
Backbone manufacturerPer Winge
- Backbone size w/o insert (bp) 8577
- Total vector size (bp) 12925
-
Modifications to backboneAddition of yeast Cen6-ArsH4-His3, origin of transfer, P. tricornutum ShBle cassette, and I-TevI nuclease doamin
-
Vector typeCRISPR, Synthetic Biology ; Episomal vector for Phaeodactylum tricornutum
-
Selectable markersZeocin, HIS3
Growth in Bacteria
-
Bacterial Resistance(s)Ampicillin, 100 μg/mL
-
Growth Temperature37°C
-
Growth Strain(s)DH5alpha
-
Copy numberHigh Copy
Gene/Insert 1
-
Gene/Insert nameOriT
-
Alt nameOrigin of Transfer
-
Insert Size (bp)771
Gene/Insert 2
-
Gene/Insert name40SRPS8 Promoter
-
SpeciesPhaeodactylum tricornutum
-
Insert Size (bp)600
Gene/Insert 3
-
Gene/Insert nameShBle
-
Alt nameZeocin resistance gene
-
SpeciesStreptoalloteichus hindustanus
-
Insert Size (bp)375
Gene/Insert 4
-
Gene/Insert name40SRPS8 Terminator
-
SpeciesPhaeodactylum tricornutum
-
Insert Size (bp)500
Gene/Insert 5
-
Gene/Insert nameCen6-ArsH4-His3
-
SpeciesS. cerevisiae (budding yeast)
-
Insert Size (bp)1349
Gene/Insert 6
-
Gene/Insert nameI-TevI nuclease and partial linker domain
-
Alt namediaTev169(G2S)2
-
SpeciesEnterobacteria phage T4T
-
Insert Size (bp)528
-
Tag
/ Fusion Protein
- Cas9 (C terminal on insert)
Resource Information
-
Supplemental Documents
-
Article Citing this Plasmid
Terms and Licenses
-
Academic/Nonprofit Terms
-
Industry Terms
- Not Available to Industry
Trademarks:
- Zeocin® is an InvivoGen trademark.
These plasmids were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
-
For your Materials & Methods section:
pPtGE35 was a gift from David Edgell (Addgene plasmid # 107999 ; http://n2t.net/addgene:107999 ; RRID:Addgene_107999) -
For your References section:
An Expanded Plasmid-Based Genetic Toolbox Enables Cas9 Genome Editing and Stable Maintenance of Synthetic Pathways in Phaeodactylum tricornutum. Slattery SS, Diamond A, Wang H, Therrien JA, Lant JT, Jazey T, Lee K, Klassen Z, Desgagne-Penix I, Karas BJ, Edgell DR. ACS Synth Biol. 2018 Jan 8. doi: 10.1021/acssynbio.7b00191. 10.1021/acssynbio.7b00191 PubMed 29298053