Dual sgRNA CRISPRi Libraries
(Pooled Library #187246, #187247, #187248, #1000000192)
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Purpose
Ultra-compact, human genome-wide CRISPRi library targeting each gene with a single element encoding a dual sgRNA cassette.
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Vector Backbone
pJR104 (Plasmid #187243) - does not express Cas9
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Depositing Labs
Ordering
Item | Catalog # | Description | Quantity | Price (USD) | ||
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Pooled Library | 1000000192 | Three tubes, each with a third of the library (Library 1-2, 3-4, and 5-6) in backbone pJR104†
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1 | $1300 | Add to Cart | |
Pooled Library | 187246 | hCRISPRi_dual_1_2 pooled library† | 1 | $540 | Add to Cart | |
Pooled Library | 187247 | hCRISPRi_dual_3_4 pooled library† | 1 | $540 | Add to Cart | |
Pooled Library | 187248 | hCRISPRi_dual_5_6 pooled library† | 1 | $540 | Add to Cart |
Library Details
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Genes/gRNAs/plasmids22,580 dual sgRNA elements
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Controls1,026 dual sgRNA control elements
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Lentiviral Generation3rd
Library Shipping
This library is delivered as suspended DNA in a microcentrifuge tube on blue ice. The tube's contents will not necessarily be frozen. For best results, minimize freeze/thaws.
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Volume∼20 µL
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Concentration50 ng/µL
Resource Information
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Protocols
- Illumina Sequencing Sample Preparation (PDF, 369 KB)
- Liquid Culture Re-Amplification Protocol (PDF, 70 KB)
- Cell Line Creation and Validation Primer (PDF, 148 KB)
- CRISPRi/a Custom Library Cloning Protocol (PDF, 406 KB)
- For more links and protocols, please see the Weissman lab's CRISPRi/a screening materials page (Link opens in a new window)
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Depositor Data
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Articles Citing this Pooled Library
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Terms and Licenses
Academic/Nonprofit TermsIndustry Terms- Not Available to Industry
Trademarks- Zeocin® is an InvivoGen trademark.
Depositor Comments
User instructions and analysis scripts are available in the lab's GitHub repository (Link opens in a new window).
Please visit https://doi.org/10.1101/2022.07.13.499814 (Link opens in a new window) for bioRxiv preprint.
These pooled libraries were created by your colleagues. Please acknowledge the Principal Investigator, cite the article in which the plasmids were described, and include Addgene in the Materials and Methods of your future publications.
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For your Materials & Methods section:
Dual sgRNA CRISPRi Libraries were a gift from Jonathan Weissman (Addgene #1000000192)
Dual sgRNA CRISPRi Library 1-2 was a gift from Jonathan Weissman (Addgene #187246)
Dual sgRNA CRISPRi Library 3-4 was a gift from Jonathan Weissman (Addgene #187247)
Dual sgRNA CRISPRi Library 5-6 was a gift from Jonathan Weissman (Addgene #187248) -
For your References section:
Maximizing CRISPRi efficacy and accessibility with dual-sgRNA libraries and optimal effectors. Replogle JM, Bonnar JL, Pogson AN, Liem CR, Maier NK, Ding Y, Russell BJ, Wang X, Leng K, Guna A, Norman TM, Pak RA, Ramos DM, Ward ME, Gilbert LA, Kampmann M, Weissman JS, Jost M. eLife. 2022 Dec 28;11:e81856. doi: 10.7554/eLife.81856. PubMed 36576240 (Link opens in a new window)