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pLS-SceI Citations (7)

Originally described in: lentiMPRA & MPRAflow for high-throughput functional characterization of gene regulatory elements
Unpublished

Articles Citing pLS-SceI

Articles
lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements. Gordon MG, Inoue F, Martin B, Schubach M, Agarwal V, Whalen S, Feng S, Zhao J, Ashuach T, Ziffra R, Kreimer A, Georgakopoulous-Soares I, Yosef N, Ye CJ, Pollard KS, Shendure J, Kircher M, Ahituv N. Nat Protoc. 2020 Aug;15(8):2387-2412. doi: 10.1038/s41596-020-0333-5. Epub 2020 Jul 8. PubMed
The cis-regulatory effects of modern human-specific variants. Weiss CV, Harshman L, Inoue F, Fraser HB, Petrov DA, Ahituv N, Gokhman D. Elife. 2021 Apr 22;10. pii: 63713. doi: 10.7554/eLife.63713. PubMed
Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation. Kreimer A, Ashuach T, Inoue F, Khodaverdian A, Deng C, Yosef N, Ahituv N. Nat Commun. 2022 Mar 21;13(1):1504. doi: 10.1038/s41467-022-28659-0. PubMed
Characterization of De Novo Promoter Variants in Autism Spectrum Disorder with Massively Parallel Reporter Assays. Koesterich J, An JY, Inoue F, Sohota A, Ahituv N, Sanders SJ, Kreimer A. Int J Mol Sci. 2023 Feb 9;24(4):3509. doi: 10.3390/ijms24043509. PubMed
Massively parallel characterization of transcriptional regulatory elements in three diverse human cell types. Agarwal V, Inoue F, Schubach M, Martin BK, Dash PM, Zhang Z, Sohota A, Noble WS, Yardimci GG, Kircher M, Shendure J, Ahituv N. bioRxiv. 2023 Mar 6:2023.03.05.531189. doi: 10.1101/2023.03.05.531189. Preprint. PubMed
Transcription factor binding site orientation and order are major drivers of gene regulatory activity. Georgakopoulos-Soares I, Deng C, Agarwal V, Chan CSY, Zhao J, Inoue F, Ahituv N. Nat Commun. 2023 Apr 22;14(1):2333. doi: 10.1038/s41467-023-37960-5. PubMed
Characterization of enhancer activity in early human neurodevelopment using Massively parallel reporter assay (MPRA) and forebrain organoids. Capauto D, Wang Y, Wu F, Norton S, Mariani J, Inoue F, Crawford GE, Ahituv N, Abyzov A, Vaccarino FM. bioRxiv [Preprint]. 2023 Aug 14:2023.08.14.553170. doi: 10.1101/2023.08.14.553170. PubMed

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